Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.79■■□□□ 1.4
KCNA3P22001 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KCNA3P22001 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.79■■□□□ 1.4
KCNA3P22001 AC007225.1-201ENST00000566331 1836 ntBASIC23.79■■□□□ 1.4
KCNA3P22001 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 AC092720.2-201ENST00000602388 1665 ntBASIC23.79■■□□□ 1.4
KCNA3P22001 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
KCNA3P22001 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNA3P22001 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNA3P22001 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNA3P22001 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.78■■□□□ 1.4
KCNA3P22001 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.78■■□□□ 1.4
KCNA3P22001 KRT8P26-201ENST00000534154 1276 ntBASIC23.78■■□□□ 1.4
KCNA3P22001 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNA3P22001 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNA3P22001 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNA3P22001 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.78■■□□□ 1.4
KCNA3P22001 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
KCNA3P22001 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNA3P22001 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
KCNA3P22001 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNA3P22001 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNA3P22001 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNA3P22001 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNA3P22001 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
KCNA3P22001 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.77■■□□□ 1.4
KCNA3P22001 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.77■■□□□ 1.4
KCNA3P22001 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.77■■□□□ 1.4
KCNA3P22001 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
KCNA3P22001 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNA3P22001 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNA3P22001 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNA3P22001 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.77■■□□□ 1.4
KCNA3P22001 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNA3P22001 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNA3P22001 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNA3P22001 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.77■■□□□ 1.4
KCNA3P22001 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.77■■□□□ 1.4
KCNA3P22001 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNA3P22001 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNA3P22001 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.76■■□□□ 1.39
KCNA3P22001 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
KCNA3P22001 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
KCNA3P22001 AP002469.2-201ENST00000531724 424 ntBASIC23.76■■□□□ 1.39
KCNA3P22001 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
KCNA3P22001 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
KCNA3P22001 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.76■■□□□ 1.39
KCNA3P22001 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.76■■□□□ 1.39
KCNA3P22001 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNA3P22001 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.76■■□□□ 1.39
KCNA3P22001 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.76■■□□□ 1.39
KCNA3P22001 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.76■■□□□ 1.39
KCNA3P22001 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
KCNA3P22001 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
KCNA3P22001 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNA3P22001 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KCNA3P22001 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNA3P22001 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNA3P22001 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.75■■□□□ 1.39
KCNA3P22001 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.75■■□□□ 1.39
KCNA3P22001 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.75■■□□□ 1.39
KCNA3P22001 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
KCNA3P22001 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNA3P22001 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
KCNA3P22001 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.75■■□□□ 1.39
KCNA3P22001 SMG8-203ENST00000578922 2178 ntBASIC23.75■■□□□ 1.39
KCNA3P22001 AL162741.1-201ENST00000565563 1558 ntBASIC23.74■■□□□ 1.39
KCNA3P22001 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.74■■□□□ 1.39
KCNA3P22001 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.74■■□□□ 1.39
KCNA3P22001 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.74■■□□□ 1.39
KCNA3P22001 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.74■■□□□ 1.39
KCNA3P22001 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
KCNA3P22001 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.74■■□□□ 1.39
KCNA3P22001 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.74■■□□□ 1.39
KCNA3P22001 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.74■■□□□ 1.39
KCNA3P22001 AC139530.3-201ENST00000620344 690 ntBASIC23.74■■□□□ 1.39
KCNA3P22001 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNA3P22001 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms