Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3BP20337 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RAB3BP20337 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RAB3BP20337 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RAB3BP20337 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RAB3BP20337 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB3BP20337 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3BP20337 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3BP20337 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RAB3BP20337 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB3BP20337 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 AL133373.2-201ENST00000623187 2828 ntBASIC16.95■□□□□ 0.3
RAB3BP20337 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 FZD10-202ENST00000539839 3282 ntBASIC16.95■□□□□ 0.3
RAB3BP20337 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAB3BP20337 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3BP20337 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
RAB3BP20337 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAB3BP20337 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAB3BP20337 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAB3BP20337 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB3BP20337 UBE2DNL-204ENST00000602536 740 ntBASIC16.94■□□□□ 0.3
RAB3BP20337 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB3BP20337 BICD1-207ENST00000551848 1962 ntBASIC16.94■□□□□ 0.3
RAB3BP20337 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3BP20337 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB3BP20337 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3BP20337 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3BP20337 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3BP20337 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB3BP20337 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.93■□□□□ 0.3
RAB3BP20337 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAB3BP20337 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB3BP20337 PCDHB18P-201ENST00000524813 2368 ntBASIC16.93■□□□□ 0.3
RAB3BP20337 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB3BP20337 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RAB3BP20337 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB3BP20337 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.93■□□□□ 0.3
RAB3BP20337 MFSD11-216ENST00000590393 1141 ntBASIC16.93■□□□□ 0.3
RAB3BP20337 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB3BP20337 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAB3BP20337 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3BP20337 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RAB3BP20337 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RAB3BP20337 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB3BP20337 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 FP475955.4-201ENST00000623131 1990 ntBASIC16.92■□□□□ 0.3
RAB3BP20337 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 MCRIP2P1-201ENST00000394346 511 ntBASIC16.92■□□□□ 0.3
RAB3BP20337 AC123595.1-201ENST00000440769 1046 ntBASIC16.92■□□□□ 0.3
RAB3BP20337 TERF1P5-201ENST00000477545 1207 ntBASIC16.92■□□□□ 0.3
RAB3BP20337 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.92■□□□□ 0.3
RAB3BP20337 AL162412.1-201ENST00000567129 965 ntBASIC16.92■□□□□ 0.3
RAB3BP20337 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3BP20337 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.92■□□□□ 0.3
RAB3BP20337 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RAB3BP20337 MYCNOS-205ENST00000641950 531 ntBASIC16.92■□□□□ 0.3
RAB3BP20337 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms