Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DPA1P20036 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 AC104417.2-201ENST00000562989 1793 ntBASIC19.53■□□□□ 0.72
HLA-DPA1P20036 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 AIRN-201ENST00000601203 4374 ntBASIC19.53■□□□□ 0.72
HLA-DPA1P20036 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DPA1P20036 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 RPPH1-201ENST00000516869 333 ntBASIC19.52■□□□□ 0.72
HLA-DPA1P20036 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DPA1P20036 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.52■□□□□ 0.71
HLA-DPA1P20036 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DPA1P20036 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DPA1P20036 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DPA1P20036 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DPA1P20036 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
HLA-DPA1P20036 AL032819.2-201ENST00000624543 2162 ntBASIC19.51■□□□□ 0.71
HLA-DPA1P20036 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DPA1P20036 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DPA1P20036 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 PRORSD1P-201ENST00000295112 541 ntBASIC19.49■□□□□ 0.71
HLA-DPA1P20036 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms