Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NFKB1P19838 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.68■□□□□ 0.74
NFKB1P19838 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.68■□□□□ 0.74
NFKB1P19838 TEX21P-204ENST00000641479 1693 ntBASIC19.68■□□□□ 0.74
NFKB1P19838 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.68■□□□□ 0.74
NFKB1P19838 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NFKB1P19838 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.68■□□□□ 0.74
NFKB1P19838 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 C1QL1P1-201ENST00000568105 661 ntBASIC19.68■□□□□ 0.74
NFKB1P19838 AC124016.1-201ENST00000609552 612 ntBASIC19.68■□□□□ 0.74
NFKB1P19838 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.68■□□□□ 0.74
NFKB1P19838 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NFKB1P19838 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 LINC01465-201ENST00000408887 1940 ntBASIC19.68■□□□□ 0.74
NFKB1P19838 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.68■□□□□ 0.74
NFKB1P19838 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.68■□□□□ 0.74
NFKB1P19838 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.68■□□□□ 0.74
NFKB1P19838 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
NFKB1P19838 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.68■□□□□ 0.74
NFKB1P19838 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.68■□□□□ 0.74
NFKB1P19838 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
NFKB1P19838 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFKB1P19838 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.68■□□□□ 0.74
NFKB1P19838 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.67■□□□□ 0.74
NFKB1P19838 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.67■□□□□ 0.74
NFKB1P19838 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.67■□□□□ 0.74
NFKB1P19838 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.67■□□□□ 0.74
NFKB1P19838 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.67■□□□□ 0.74
NFKB1P19838 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFKB1P19838 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NFKB1P19838 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.67■□□□□ 0.74
NFKB1P19838 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.67■□□□□ 0.74
NFKB1P19838 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 AC018445.3-201ENST00000624177 1945 ntBASIC19.66■□□□□ 0.74
NFKB1P19838 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.66■□□□□ 0.74
NFKB1P19838 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.66■□□□□ 0.74
NFKB1P19838 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.66■□□□□ 0.74
NFKB1P19838 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.66■□□□□ 0.74
NFKB1P19838 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NFKB1P19838 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.66■□□□□ 0.74
NFKB1P19838 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NFKB1P19838 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.66■□□□□ 0.74
NFKB1P19838 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NFKB1P19838 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NFKB1P19838 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFKB1P19838 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFKB1P19838 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NFKB1P19838 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFKB1P19838 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFKB1P19838 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFKB1P19838 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.65■□□□□ 0.74
NFKB1P19838 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.65■□□□□ 0.74
NFKB1P19838 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NFKB1P19838 TSPY20P-201ENST00000450910 630 ntBASIC19.65■□□□□ 0.74
NFKB1P19838 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.65■□□□□ 0.74
NFKB1P19838 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.65■□□□□ 0.74
NFKB1P19838 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NFKB1P19838 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NFKB1P19838 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NFKB1P19838 AC098818.2-201ENST00000564925 2320 ntBASIC19.65■□□□□ 0.74
NFKB1P19838 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.65■□□□□ 0.74
NFKB1P19838 AP000974.1-201ENST00000623909 2387 ntBASIC19.65■□□□□ 0.74
NFKB1P19838 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NFKB1P19838 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
NFKB1P19838 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.64■□□□□ 0.74
NFKB1P19838 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
NFKB1P19838 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms