Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC130P13994 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC130P13994 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC130P13994 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC130P13994 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC130P13994 Z85996.1-201ENST00000494644 937 ntBASIC20.51■□□□□ 0.87
CCDC130P13994 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC130P13994 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC130P13994 AL160286.2-201ENST00000567150 934 ntBASIC20.51■□□□□ 0.87
CCDC130P13994 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC130P13994 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC130P13994 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC130P13994 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC130P13994 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC130P13994 AC104417.2-201ENST00000562989 1793 ntBASIC20.5■□□□□ 0.87
CCDC130P13994 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC130P13994 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC130P13994 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC130P13994 MESTP1-201ENST00000404287 994 ntBASIC20.5■□□□□ 0.87
CCDC130P13994 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.5■□□□□ 0.87
CCDC130P13994 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC130P13994 AC011506.1-201ENST00000474329 610 ntBASIC20.5■□□□□ 0.87
CCDC130P13994 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.5■□□□□ 0.87
CCDC130P13994 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC130P13994 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC130P13994 AC026271.3-201ENST00000571884 352 ntBASIC20.5■□□□□ 0.87
CCDC130P13994 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC130P13994 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC130P13994 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC130P13994 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC130P13994 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCDC130P13994 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC130P13994 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC130P13994 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC130P13994 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC130P13994 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC130P13994 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC130P13994 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC130P13994 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC130P13994 MIR6786-201ENST00000616843 113 ntBASIC20.49■□□□□ 0.87
CCDC130P13994 RCC2P6-201ENST00000526625 1557 ntBASIC20.49■□□□□ 0.87
CCDC130P13994 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC130P13994 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC130P13994 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC130P13994 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC130P13994 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC130P13994 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC130P13994 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC130P13994 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 B3GAT3P1-201ENST00000471720 806 ntBASIC20.48■□□□□ 0.87
CCDC130P13994 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC130P13994 AC116562.2-201ENST00000507042 360 ntBASIC20.48■□□□□ 0.87
CCDC130P13994 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC130P13994 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CCDC130P13994 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC130P13994 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC130P13994 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC130P13994 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC130P13994 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CCDC130P13994 SDHAP1-207ENST00000440850 2000 ntBASIC20.48■□□□□ 0.87
CCDC130P13994 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC130P13994 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC130P13994 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC130P13994 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC130P13994 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC130P13994 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms