Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A2P13942 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.76■■□□□ 1.39
COL11A2P13942 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
COL11A2P13942 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.76■■□□□ 1.39
COL11A2P13942 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A2P13942 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
COL11A2P13942 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.76■■□□□ 1.39
COL11A2P13942 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
COL11A2P13942 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A2P13942 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.76■■□□□ 1.39
COL11A2P13942 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
COL11A2P13942 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.76■■□□□ 1.39
COL11A2P13942 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A2P13942 AC093525.10-201ENST00000625130 1569 ntBASIC23.75■■□□□ 1.39
COL11A2P13942 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A2P13942 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A2P13942 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A2P13942 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A2P13942 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 AP002383.4-201ENST00000442518 975 ntBASIC23.75■■□□□ 1.39
COL11A2P13942 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.75■■□□□ 1.39
COL11A2P13942 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A2P13942 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL11A2P13942 AL732292.2-201ENST00000609649 430 ntBASIC23.75■■□□□ 1.39
COL11A2P13942 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
COL11A2P13942 AL031008.1-201ENST00000619963 541 ntBASIC23.75■■□□□ 1.39
COL11A2P13942 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.74■■□□□ 1.39
COL11A2P13942 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A2P13942 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A2P13942 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
COL11A2P13942 KRT17P6-201ENST00000453795 1220 ntBASIC23.74■■□□□ 1.39
COL11A2P13942 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.74■■□□□ 1.39
COL11A2P13942 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.74■■□□□ 1.39
COL11A2P13942 UNC93B7-201ENST00000509439 705 ntBASIC23.74■■□□□ 1.39
COL11A2P13942 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.74■■□□□ 1.39
COL11A2P13942 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
COL11A2P13942 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
COL11A2P13942 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A2P13942 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A2P13942 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A2P13942 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL11A2P13942 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
COL11A2P13942 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.73■■□□□ 1.39
COL11A2P13942 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A2P13942 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.73■■□□□ 1.39
COL11A2P13942 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A2P13942 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A2P13942 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.73■■□□□ 1.39
COL11A2P13942 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.73■■□□□ 1.39
COL11A2P13942 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.73■■□□□ 1.39
COL11A2P13942 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A2P13942 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.73■■□□□ 1.39
COL11A2P13942 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.73■■□□□ 1.39
COL11A2P13942 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A2P13942 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL11A2P13942 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A2P13942 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A2P13942 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A2P13942 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A2P13942 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A2P13942 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL11A2P13942 AC079781.3-201ENST00000449110 356 ntBASIC23.72■■□□□ 1.39
COL11A2P13942 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.72■■□□□ 1.39
COL11A2P13942 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.72■■□□□ 1.39
COL11A2P13942 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.72■■□□□ 1.39
COL11A2P13942 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 AC004870.1-201ENST00000315132 882 ntBASIC23.71■■□□□ 1.39
COL11A2P13942 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.71■■□□□ 1.39
COL11A2P13942 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.71■■□□□ 1.39
COL11A2P13942 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.71■■□□□ 1.39
COL11A2P13942 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.71■■□□□ 1.39
COL11A2P13942 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 AC016734.2-201ENST00000624325 1377 ntBASIC23.71■■□□□ 1.39
COL11A2P13942 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
COL11A2P13942 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
COL11A2P13942 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL11A2P13942 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.71■■□□□ 1.39
COL11A2P13942 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.7■■□□□ 1.39
COL11A2P13942 AC079834.2-201ENST00000609776 1949 ntBASIC23.7■■□□□ 1.39
COL11A2P13942 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.7■■□□□ 1.39
COL11A2P13942 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.7■■□□□ 1.39
COL11A2P13942 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.39
COL11A2P13942 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.7■■□□□ 1.39
COL11A2P13942 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL11A2P13942 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
COL11A2P13942 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL11A2P13942 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL11A2P13942 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms