Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.11□□□□□ -0.47
APOBP04114 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.11□□□□□ -0.47
APOBP04114 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOBP04114 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
APOBP04114 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.1□□□□□ -0.47
APOBP04114 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.1□□□□□ -0.47
APOBP04114 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
APOBP04114 RASA4DP-201ENST00000460726 1199 ntBASIC12.1□□□□□ -0.47
APOBP04114 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.1□□□□□ -0.47
APOBP04114 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.1□□□□□ -0.47
APOBP04114 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 AL162741.1-201ENST00000565563 1558 ntBASIC12.1□□□□□ -0.47
APOBP04114 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 AL049796.1-201ENST00000565336 1766 ntBASIC12.1□□□□□ -0.47
APOBP04114 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.1□□□□□ -0.47
APOBP04114 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOBP04114 AL662844.1-201ENST00000546340 181 ntBASIC12.1□□□□□ -0.47
APOBP04114 AC091304.2-201ENST00000564639 760 ntBASIC12.1□□□□□ -0.47
APOBP04114 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
APOBP04114 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
APOBP04114 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 AC121338.2-201ENST00000622535 1744 ntBASIC12.09□□□□□ -0.47
APOBP04114 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 PHGDH-210ENST00000641115 1638 ntBASIC12.09□□□□□ -0.47
APOBP04114 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.09□□□□□ -0.47
APOBP04114 FAAHP1-202ENST00000446499 1238 ntBASIC12.09□□□□□ -0.47
APOBP04114 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
APOBP04114 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 AC120114.3-201ENST00000611923 658 ntBASIC12.09□□□□□ -0.47
APOBP04114 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.09□□□□□ -0.47
APOBP04114 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
APOBP04114 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.09□□□□□ -0.47
APOBP04114 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.09□□□□□ -0.47
APOBP04114 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 IL9RP2-201ENST00000423948 1312 ntBASIC12.09□□□□□ -0.47
APOBP04114 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC12.09□□□□□ -0.47
APOBP04114 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOBP04114 BID-203ENST00000399765 1879 ntTSL 2 BASIC12.08□□□□□ -0.47
APOBP04114 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC12.08□□□□□ -0.47
APOBP04114 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
APOBP04114 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
APOBP04114 KRT18P13-201ENST00000400056 1290 ntBASIC12.08□□□□□ -0.48
APOBP04114 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 SEC1P-202ENST00000473944 940 ntBASIC12.08□□□□□ -0.48
APOBP04114 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
APOBP04114 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms