Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
MT-CO1P00395 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-CO1P00395 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.83■□□□□ 0.76
MT-CO1P00395 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MT-CO1P00395 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MT-CO1P00395 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MT-CO1P00395 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.82■□□□□ 0.76
MT-CO1P00395 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.82■□□□□ 0.76
MT-CO1P00395 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MT-CO1P00395 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.82■□□□□ 0.76
MT-CO1P00395 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-CO1P00395 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MT-CO1P00395 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-CO1P00395 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.82■□□□□ 0.76
MT-CO1P00395 NUDT16P1-203ENST00000513809 620 ntBASIC19.82■□□□□ 0.76
MT-CO1P00395 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.82■□□□□ 0.76
MT-CO1P00395 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.82■□□□□ 0.76
MT-CO1P00395 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-CO1P00395 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MT-CO1P00395 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.82■□□□□ 0.76
MT-CO1P00395 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-CO1P00395 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-CO1P00395 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-CO1P00395 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-CO1P00395 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MT-CO1P00395 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-CO1P00395 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-CO1P00395 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-CO1P00395 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-CO1P00395 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-CO1P00395 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.81■□□□□ 0.76
MT-CO1P00395 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.81■□□□□ 0.76
MT-CO1P00395 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.81■□□□□ 0.76
MT-CO1P00395 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.81■□□□□ 0.76
MT-CO1P00395 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.81■□□□□ 0.76
MT-CO1P00395 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-CO1P00395 REXO1L10P-201ENST00000615707 1290 ntBASIC19.81■□□□□ 0.76
MT-CO1P00395 REXO1L12P-201ENST00000622156 912 ntBASIC19.81■□□□□ 0.76
MT-CO1P00395 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MT-CO1P00395 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
MT-CO1P00395 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-CO1P00395 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 LINC01465-201ENST00000408887 1940 ntBASIC19.8■□□□□ 0.76
MT-CO1P00395 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MT-CO1P00395 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.8■□□□□ 0.76
MT-CO1P00395 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-CO1P00395 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-CO1P00395 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MT-CO1P00395 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-CO1P00395 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-CO1P00395 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 AC004980.1-204ENST00000429707 299 ntBASIC19.79■□□□□ 0.76
MT-CO1P00395 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
MT-CO1P00395 BX088651.1-201ENST00000540551 451 ntBASIC19.79■□□□□ 0.76
MT-CO1P00395 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.79■□□□□ 0.76
MT-CO1P00395 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-CO1P00395 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.79■□□□□ 0.76
MT-CO1P00395 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-CO1P00395 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-CO1P00395 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-CO1P00395 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-CO1P00395 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
MT-CO1P00395 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.78■□□□□ 0.76
MT-CO1P00395 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-CO1P00395 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms