Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFRA3O60609 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.83■□□□□ 0.61
GFRA3O60609 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GFRA3O60609 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFRA3O60609 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA3O60609 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA3O60609 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA3O60609 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.83■□□□□ 0.6
GFRA3O60609 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.83■□□□□ 0.6
GFRA3O60609 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.83■□□□□ 0.6
GFRA3O60609 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.83■□□□□ 0.6
GFRA3O60609 Z69720.1-201ENST00000601483 472 ntBASIC18.83■□□□□ 0.6
GFRA3O60609 AC148477.8-201ENST00000624298 468 ntBASIC18.83■□□□□ 0.6
GFRA3O60609 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA3O60609 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA3O60609 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GFRA3O60609 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA3O60609 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFRA3O60609 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
GFRA3O60609 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.83■□□□□ 0.6
GFRA3O60609 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GFRA3O60609 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.82■□□□□ 0.6
GFRA3O60609 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.82■□□□□ 0.6
GFRA3O60609 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.82■□□□□ 0.6
GFRA3O60609 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
GFRA3O60609 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.82■□□□□ 0.6
GFRA3O60609 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
GFRA3O60609 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.82■□□□□ 0.6
GFRA3O60609 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 ECEL1P1-201ENST00000373592 1742 ntBASIC18.82■□□□□ 0.6
GFRA3O60609 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GFRA3O60609 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFRA3O60609 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GFRA3O60609 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
GFRA3O60609 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
GFRA3O60609 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
GFRA3O60609 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.81■□□□□ 0.6
GFRA3O60609 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.81■□□□□ 0.6
GFRA3O60609 FAM8A3P-201ENST00000427218 844 ntBASIC18.81■□□□□ 0.6
GFRA3O60609 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.81■□□□□ 0.6
GFRA3O60609 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GFRA3O60609 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.81■□□□□ 0.6
GFRA3O60609 AC139887.3-201ENST00000568585 713 ntBASIC18.81■□□□□ 0.6
GFRA3O60609 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.81■□□□□ 0.6
GFRA3O60609 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
GFRA3O60609 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.81■□□□□ 0.6
GFRA3O60609 AC024243.1-201ENST00000609234 778 ntBASIC18.81■□□□□ 0.6
GFRA3O60609 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.81■□□□□ 0.6
GFRA3O60609 AC112497.1-201ENST00000624824 639 ntBASIC18.81■□□□□ 0.6
GFRA3O60609 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GFRA3O60609 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.81■□□□□ 0.6
GFRA3O60609 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GFRA3O60609 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.81■□□□□ 0.6
GFRA3O60609 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.81■□□□□ 0.6
GFRA3O60609 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFRA3O60609 AC233702.3-201ENST00000578656 1387 ntBASIC18.81■□□□□ 0.6
GFRA3O60609 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.8■□□□□ 0.6
GFRA3O60609 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GFRA3O60609 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.8■□□□□ 0.6
GFRA3O60609 MIR662-201ENST00000384847 95 ntBASIC18.8■□□□□ 0.6
GFRA3O60609 AL035633.1-201ENST00000406139 838 ntBASIC18.8■□□□□ 0.6
GFRA3O60609 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.8■□□□□ 0.6
GFRA3O60609 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.8■□□□□ 0.6
GFRA3O60609 RNF126P1-202ENST00000569893 925 ntBASIC18.8■□□□□ 0.6
GFRA3O60609 MIR4674-201ENST00000582457 87 ntBASIC18.8■□□□□ 0.6
GFRA3O60609 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
GFRA3O60609 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.8■□□□□ 0.6
GFRA3O60609 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms