Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
FOXD2O60548 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.46■□□□□ 0.71
FOXD2O60548 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXD2O60548 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
FOXD2O60548 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXD2O60548 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.46■□□□□ 0.71
FOXD2O60548 AC093458.2-201ENST00000623150 629 ntBASIC19.46■□□□□ 0.71
FOXD2O60548 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.46■□□□□ 0.71
FOXD2O60548 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
FOXD2O60548 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXD2O60548 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXD2O60548 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXD2O60548 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXD2O60548 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
FOXD2O60548 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXD2O60548 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
FOXD2O60548 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXD2O60548 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FOXD2O60548 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.45■□□□□ 0.7
FOXD2O60548 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXD2O60548 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.45■□□□□ 0.7
FOXD2O60548 SLC25A1P4-201ENST00000567977 778 ntBASIC19.45■□□□□ 0.7
FOXD2O60548 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.45■□□□□ 0.7
FOXD2O60548 AP000692.2-201ENST00000608391 879 ntBASIC19.45■□□□□ 0.7
FOXD2O60548 AC069148.1-201ENST00000608741 768 ntBASIC19.45■□□□□ 0.7
FOXD2O60548 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXD2O60548 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
FOXD2O60548 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXD2O60548 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXD2O60548 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.44■□□□□ 0.7
FOXD2O60548 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXD2O60548 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.44■□□□□ 0.7
FOXD2O60548 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
FOXD2O60548 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXD2O60548 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXD2O60548 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD2O60548 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 KRT8P36-201ENST00000489121 1440 ntBASIC19.43■□□□□ 0.7
FOXD2O60548 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXD2O60548 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXD2O60548 AP006587.1-201ENST00000534129 1502 ntBASIC19.43■□□□□ 0.7
FOXD2O60548 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.43■□□□□ 0.7
FOXD2O60548 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXD2O60548 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXD2O60548 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXD2O60548 CLEC4GP1-201ENST00000596555 870 ntBASIC19.43■□□□□ 0.7
FOXD2O60548 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXD2O60548 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXD2O60548 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXD2O60548 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
FOXD2O60548 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXD2O60548 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXD2O60548 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD2O60548 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXD2O60548 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 AC004980.1-204ENST00000429707 299 ntBASIC19.42■□□□□ 0.7
FOXD2O60548 AC011506.1-201ENST00000474329 610 ntBASIC19.42■□□□□ 0.7
FOXD2O60548 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXD2O60548 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.42■□□□□ 0.7
FOXD2O60548 AC141257.4-201ENST00000634557 245 ntBASIC19.42■□□□□ 0.7
FOXD2O60548 AC136944.6-201ENST00000634818 245 ntBASIC19.42■□□□□ 0.7
FOXD2O60548 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms