Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SYNCRIPO60506 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 AC112907.3-201ENST00000577781 2400 ntBASIC19.76■□□□□ 0.75
SYNCRIPO60506 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 AC113347.1-201ENST00000413321 391 ntBASIC19.76■□□□□ 0.75
SYNCRIPO60506 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 AL137013.1-201ENST00000432946 1228 ntBASIC19.76■□□□□ 0.75
SYNCRIPO60506 AC011506.1-201ENST00000474329 610 ntBASIC19.76■□□□□ 0.75
SYNCRIPO60506 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 AFG3L1P-217ENST00000557444 2447 ntBASIC19.76■□□□□ 0.75
SYNCRIPO60506 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 TMEM179-206ENST00000616017 1645 ntBASIC19.76■□□□□ 0.75
SYNCRIPO60506 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.76■□□□□ 0.75
SYNCRIPO60506 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNCRIPO60506 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 CRYGFP-201ENST00000418459 633 ntBASIC19.75■□□□□ 0.75
SYNCRIPO60506 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.75■□□□□ 0.75
SYNCRIPO60506 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNCRIPO60506 AP001271.2-201ENST00000624018 1556 ntBASIC19.74■□□□□ 0.75
SYNCRIPO60506 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 AL049597.2-201ENST00000565575 961 ntBASIC19.74■□□□□ 0.75
SYNCRIPO60506 AP005242.2-201ENST00000580065 1175 ntBASIC19.74■□□□□ 0.75
SYNCRIPO60506 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SYNCRIPO60506 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNCRIPO60506 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNCRIPO60506 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNCRIPO60506 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNCRIPO60506 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNCRIPO60506 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNCRIPO60506 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNCRIPO60506 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SYNCRIPO60506 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNCRIPO60506 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SYNCRIPO60506 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNCRIPO60506 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNCRIPO60506 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms