Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
HOXA2O43364 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HOXA2O43364 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXA2O43364 AL162377.1-201ENST00000618844 1793 ntBASIC20.73■□□□□ 0.91
HOXA2O43364 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXA2O43364 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXA2O43364 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXA2O43364 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXA2O43364 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXA2O43364 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXA2O43364 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HOXA2O43364 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HOXA2O43364 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HOXA2O43364 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA2O43364 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HOXA2O43364 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HOXA2O43364 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXA2O43364 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA2O43364 NEK4P2-201ENST00000580004 1012 ntBASIC20.72■□□□□ 0.91
HOXA2O43364 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HOXA2O43364 AL023973.1-201ENST00000624619 620 ntBASIC20.72■□□□□ 0.91
HOXA2O43364 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA2O43364 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HOXA2O43364 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA2O43364 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXA2O43364 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA2O43364 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 GABARAPL3-202ENST00000624044 1851 ntBASIC20.71■□□□□ 0.91
HOXA2O43364 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.71■□□□□ 0.91
HOXA2O43364 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA2O43364 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA2O43364 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HOXA2O43364 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXA2O43364 AL441883.1-201ENST00000566170 1045 ntBASIC20.71■□□□□ 0.91
HOXA2O43364 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA2O43364 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.7■□□□□ 0.91
HOXA2O43364 KRT8P45-201ENST00000414328 1447 ntBASIC20.7■□□□□ 0.9
HOXA2O43364 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA2O43364 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA2O43364 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HOXA2O43364 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA2O43364 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA2O43364 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA2O43364 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA2O43364 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA2O43364 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA2O43364 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA2O43364 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA2O43364 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXA2O43364 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA2O43364 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXA2O43364 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA2O43364 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXA2O43364 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA2O43364 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA2O43364 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA2O43364 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA2O43364 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA2O43364 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA2O43364 AL671277.2-201ENST00000458060 996 ntBASIC20.69■□□□□ 0.9
HOXA2O43364 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXA2O43364 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA2O43364 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXA2O43364 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA2O43364 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXA2O43364 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA2O43364 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA2O43364 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA2O43364 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA2O43364 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA2O43364 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA2O43364 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HOXA2O43364 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA2O43364 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms