Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.2■□□□□ 0.5
RRP8O43159 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 TSPY21P-201ENST00000433481 731 ntBASIC18.2■□□□□ 0.5
RRP8O43159 TSPY23P-201ENST00000440136 739 ntBASIC18.2■□□□□ 0.5
RRP8O43159 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.2■□□□□ 0.5
RRP8O43159 KRT17P6-201ENST00000453795 1220 ntBASIC18.2■□□□□ 0.5
RRP8O43159 AP003041.3-201ENST00000527151 707 ntBASIC18.2■□□□□ 0.5
RRP8O43159 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 AC006538.3-201ENST00000612495 578 ntBASIC18.2■□□□□ 0.5
RRP8O43159 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.2■□□□□ 0.5
RRP8O43159 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RRP8O43159 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RRP8O43159 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RRP8O43159 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RRP8O43159 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RRP8O43159 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.19■□□□□ 0.5
RRP8O43159 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RRP8O43159 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.19■□□□□ 0.5
RRP8O43159 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.19■□□□□ 0.5
RRP8O43159 NEK4P2-201ENST00000580004 1012 ntBASIC18.19■□□□□ 0.5
RRP8O43159 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RRP8O43159 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RRP8O43159 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.19■□□□□ 0.5
RRP8O43159 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.19■□□□□ 0.5
RRP8O43159 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
RRP8O43159 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.18■□□□□ 0.5
RRP8O43159 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.18■□□□□ 0.5
RRP8O43159 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 KRT8P45-201ENST00000414328 1447 ntBASIC18.18■□□□□ 0.5
RRP8O43159 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.18■□□□□ 0.5
RRP8O43159 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RRP8O43159 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RRP8O43159 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.18■□□□□ 0.5
RRP8O43159 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.18■□□□□ 0.5
RRP8O43159 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RRP8O43159 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RRP8O43159 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.18■□□□□ 0.5
RRP8O43159 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RRP8O43159 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 AP000593.1-201ENST00000393668 712 ntBASIC18.17■□□□□ 0.5
RRP8O43159 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.17■□□□□ 0.5
RRP8O43159 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.17■□□□□ 0.5
RRP8O43159 Z85996.1-201ENST00000494644 937 ntBASIC18.17■□□□□ 0.5
RRP8O43159 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.17■□□□□ 0.5
RRP8O43159 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RRP8O43159 AC023511.2-201ENST00000618803 211 ntBASIC18.17■□□□□ 0.5
RRP8O43159 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.17■□□□□ 0.5
RRP8O43159 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RRP8O43159 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
RRP8O43159 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RRP8O43159 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RRP8O43159 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RRP8O43159 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
RRP8O43159 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.16■□□□□ 0.5
RRP8O43159 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.16■□□□□ 0.5
RRP8O43159 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 PVRIG2P-201ENST00000435460 978 ntBASIC18.16■□□□□ 0.5
RRP8O43159 AP000347.1-202ENST00000435868 847 ntBASIC18.16■□□□□ 0.5
RRP8O43159 NPAP1P7-201ENST00000613027 823 ntBASIC18.16■□□□□ 0.5
RRP8O43159 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.16■□□□□ 0.5
RRP8O43159 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
RRP8O43159 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
RRP8O43159 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RRP8O43159 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms