Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.17■□□□□ 0.98
TNRC18O15417 IGHV3-47-201ENST00000425060 335 ntBASIC21.17■□□□□ 0.98
TNRC18O15417 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.17■□□□□ 0.98
TNRC18O15417 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.17■□□□□ 0.98
TNRC18O15417 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.17■□□□□ 0.98
TNRC18O15417 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNRC18O15417 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.16■□□□□ 0.98
TNRC18O15417 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
TNRC18O15417 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.16■□□□□ 0.98
TNRC18O15417 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
TNRC18O15417 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TNRC18O15417 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.16■□□□□ 0.98
TNRC18O15417 DNAJB3-201ENST00000446806 729 ntBASIC21.16■□□□□ 0.98
TNRC18O15417 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.16■□□□□ 0.98
TNRC18O15417 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.16■□□□□ 0.98
TNRC18O15417 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNRC18O15417 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.16■□□□□ 0.98
TNRC18O15417 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.16■□□□□ 0.98
TNRC18O15417 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNRC18O15417 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNRC18O15417 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNRC18O15417 AC211486.1-202ENST00000416371 468 ntBASIC21.15■□□□□ 0.98
TNRC18O15417 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.15■□□□□ 0.98
TNRC18O15417 AC211476.1-201ENST00000503899 468 ntBASIC21.15■□□□□ 0.98
TNRC18O15417 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNRC18O15417 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNRC18O15417 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.15■□□□□ 0.98
TNRC18O15417 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNRC18O15417 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.15■□□□□ 0.98
TNRC18O15417 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.15■□□□□ 0.98
TNRC18O15417 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNRC18O15417 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.15■□□□□ 0.98
TNRC18O15417 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.15■□□□□ 0.98
TNRC18O15417 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNRC18O15417 AL596442.2-201ENST00000610240 980 ntBASIC21.15■□□□□ 0.98
TNRC18O15417 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.14■□□□□ 0.98
TNRC18O15417 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNRC18O15417 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
TNRC18O15417 MIR662-201ENST00000384847 95 ntBASIC21.14■□□□□ 0.97
TNRC18O15417 AL645939.2-201ENST00000427340 991 ntBASIC21.14■□□□□ 0.97
TNRC18O15417 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNRC18O15417 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TNRC18O15417 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.14■□□□□ 0.97
TNRC18O15417 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
TNRC18O15417 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNRC18O15417 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNRC18O15417 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNRC18O15417 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.14■□□□□ 0.97
TNRC18O15417 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.14■□□□□ 0.97
TNRC18O15417 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNRC18O15417 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TNRC18O15417 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNRC18O15417 Z69720.1-201ENST00000601483 472 ntBASIC21.13■□□□□ 0.97
TNRC18O15417 AL096865.1-201ENST00000606796 927 ntBASIC21.13■□□□□ 0.97
TNRC18O15417 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.13■□□□□ 0.97
TNRC18O15417 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNRC18O15417 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNRC18O15417 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNRC18O15417 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TNRC18O15417 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TNRC18O15417 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.13■□□□□ 0.97
TNRC18O15417 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNRC18O15417 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.13■□□□□ 0.97
TNRC18O15417 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.13■□□□□ 0.97
TNRC18O15417 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TNRC18O15417 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNRC18O15417 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNRC18O15417 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.12■□□□□ 0.97
TNRC18O15417 AC004832.2-201ENST00000426397 482 ntBASIC21.12■□□□□ 0.97
TNRC18O15417 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.12■□□□□ 0.97
TNRC18O15417 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.12■□□□□ 0.97
TNRC18O15417 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.12■□□□□ 0.97
TNRC18O15417 AC116407.3-201ENST00000623905 1129 ntBASIC21.12■□□□□ 0.97
TNRC18O15417 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.12■□□□□ 0.97
TNRC18O15417 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.12■□□□□ 0.97
TNRC18O15417 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.12■□□□□ 0.97
TNRC18O15417 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNRC18O15417 HNRNPDP1-201ENST00000439535 754 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms