Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 AC010536.3-201ENST00000620306 533 ntBASIC13.24□□□□□ -0.29
NDUFA1O15239 AC013268.1-206ENST00000638368 961 ntBASIC13.24□□□□□ -0.29
NDUFA1O15239 AC112229.1-201ENST00000639295 961 ntBASIC13.24□□□□□ -0.29
NDUFA1O15239 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 AL161938.1-201ENST00000569833 2180 ntBASIC13.24□□□□□ -0.29
NDUFA1O15239 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFA1O15239 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFA1O15239 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA1O15239 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.23□□□□□ -0.29
NDUFA1O15239 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 KRT16P6-202ENST00000425692 1426 ntBASIC13.23□□□□□ -0.29
NDUFA1O15239 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.23□□□□□ -0.29
NDUFA1O15239 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.23□□□□□ -0.29
NDUFA1O15239 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NDUFA1O15239 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.23□□□□□ -0.29
NDUFA1O15239 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.23□□□□□ -0.29
NDUFA1O15239 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.23□□□□□ -0.29
NDUFA1O15239 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NDUFA1O15239 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 NTF6G-201ENST00000591094 616 ntBASIC13.23□□□□□ -0.29
NDUFA1O15239 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 AC006333.2-201ENST00000607957 2099 ntBASIC13.23□□□□□ -0.29
NDUFA1O15239 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NDUFA1O15239 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA1O15239 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.23□□□□□ -0.29
NDUFA1O15239 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA1O15239 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA1O15239 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NDUFA1O15239 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA1O15239 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
NDUFA1O15239 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA1O15239 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA1O15239 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NDUFA1O15239 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA1O15239 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA1O15239 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.22□□□□□ -0.29
NDUFA1O15239 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA1O15239 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 CYP21A1P-202ENST00000354927 1481 ntBASIC13.22□□□□□ -0.29
NDUFA1O15239 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA1O15239 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA1O15239 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms