Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN3O00409 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXN3O00409 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
FOXN3O00409 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FOXN3O00409 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXN3O00409 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXN3O00409 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 AL023875.1-201ENST00000640777 796 ntBASIC20.72■□□□□ 0.91
FOXN3O00409 AL049812.1-201ENST00000432563 2267 ntBASIC20.72■□□□□ 0.91
FOXN3O00409 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXN3O00409 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
FOXN3O00409 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXN3O00409 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN3O00409 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
FOXN3O00409 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXN3O00409 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXN3O00409 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXN3O00409 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXN3O00409 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FOXN3O00409 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN3O00409 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.7■□□□□ 0.91
FOXN3O00409 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN3O00409 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN3O00409 AC004408.2-201ENST00000623613 2777 ntBASIC20.7■□□□□ 0.9
FOXN3O00409 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.7■□□□□ 0.9
FOXN3O00409 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
FOXN3O00409 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN3O00409 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN3O00409 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.7■□□□□ 0.9
FOXN3O00409 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.7■□□□□ 0.9
FOXN3O00409 MIR4651-201ENST00000582622 73 ntBASIC20.7■□□□□ 0.9
FOXN3O00409 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXN3O00409 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN3O00409 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN3O00409 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN3O00409 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXN3O00409 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FOXN3O00409 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
FOXN3O00409 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
FOXN3O00409 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN3O00409 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN3O00409 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FOXN3O00409 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN3O00409 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FOXN3O00409 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FOXN3O00409 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXN3O00409 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN3O00409 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms