Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 CYP2T1P-201ENST00000432607 1285 ntBASIC17.9■□□□□ 0.46
TNFRSF11BO00300 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 AC009113.1-201ENST00000570267 2443 ntBASIC17.9■□□□□ 0.46
TNFRSF11BO00300 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNFRSF11BO00300 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNFRSF11BO00300 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TNFRSF11BO00300 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 ZNF815P-204ENST00000434898 1737 ntBASIC17.89■□□□□ 0.45
TNFRSF11BO00300 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
TNFRSF11BO00300 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
TNFRSF11BO00300 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms