Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 AL160286.2-201ENST00000567150 934 ntBASIC13.83□□□□□ -0.2
LYRM9A8MSI8 HLA-A-209ENST00000638375 975 ntBASIC13.83□□□□□ -0.2
LYRM9A8MSI8 AL049637.2-201ENST00000641778 930 ntBASIC13.83□□□□□ -0.2
LYRM9A8MSI8 AL031985.4-201ENST00000642138 673 ntBASIC13.83□□□□□ -0.2
LYRM9A8MSI8 ZNF815P-204ENST00000434898 1737 ntBASIC13.83□□□□□ -0.2
LYRM9A8MSI8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.83□□□□□ -0.2
LYRM9A8MSI8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 PCDHAC2-203ENST00000615316 3011 ntBASIC13.82□□□□□ -0.2
LYRM9A8MSI8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CD177P1-201ENST00000606252 935 ntBASIC13.82□□□□□ -0.2
LYRM9A8MSI8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CR392000.1-201ENST00000624770 1228 ntBASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYRM9A8MSI8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.81□□□□□ -0.2
LYRM9A8MSI8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 Z99916.2-201ENST00000604037 246 ntBASIC13.81□□□□□ -0.2
LYRM9A8MSI8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.81□□□□□ -0.2
LYRM9A8MSI8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYRM9A8MSI8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms