Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.64■□□□□ 0.74
TBC1D3BA6NDS4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TBC1D3BA6NDS4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TBC1D3BA6NDS4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 CA15P1-201ENST00000481698 905 ntBASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 CKBP1-201ENST00000565489 1086 ntBASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D3BA6NDS4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 RNF152P1-201ENST00000397754 604 ntBASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 AC063952.2-201ENST00000498792 1227 ntBASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 AC022616.7-201ENST00000525383 220 ntBASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 AL512604.3-201ENST00000569583 964 ntBASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TBC1D3BA6NDS4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 COX11P1-201ENST00000489116 835 ntBASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms