Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
TRIM49BA6NDI0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRIM49BA6NDI0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM49BA6NDI0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM49BA6NDI0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.32■■□□□ 1
TRIM49BA6NDI0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
TRIM49BA6NDI0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM49BA6NDI0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.31■■□□□ 1
TRIM49BA6NDI0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 POM121L13P-201ENST00000422362 380 ntBASIC21.31■■□□□ 1
TRIM49BA6NDI0 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.31■■□□□ 1
TRIM49BA6NDI0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM49BA6NDI0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
TRIM49BA6NDI0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.31■■□□□ 1
TRIM49BA6NDI0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
TRIM49BA6NDI0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 ID1-201ENST00000376105 1233 ntBASIC21.3■■□□□ 1
TRIM49BA6NDI0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 TUBB8P6-201ENST00000436895 1288 ntBASIC21.3■■□□□ 1
TRIM49BA6NDI0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM49BA6NDI0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
TRIM49BA6NDI0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRIM49BA6NDI0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 AC006333.2-201ENST00000607957 2099 ntBASIC21.29■■□□□ 1
TRIM49BA6NDI0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 RNA5SP413-201ENST00000516373 109 ntBASIC21.29■■□□□ 1
TRIM49BA6NDI0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.29■■□□□ 1
TRIM49BA6NDI0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRIM49BA6NDI0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
TRIM49BA6NDI0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM49BA6NDI0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 FP475955.4-201ENST00000623131 1990 ntBASIC21.28■■□□□ 1
TRIM49BA6NDI0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 CROCCP3-202ENST00000420820 1947 ntBASIC21.28■■□□□ 1
TRIM49BA6NDI0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms