Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-4A0A0C4DH59 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-4A0A0C4DH59 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.08■□□□□ 0.65
TRBV5-4A0A0C4DH59 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-4A0A0C4DH59 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-4A0A0C4DH59 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.08■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.08■□□□□ 0.65
TRBV5-4A0A0C4DH59 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC026271.3-201ENST00000571884 352 ntBASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV5-4A0A0C4DH59 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 Z99916.2-201ENST00000604037 246 ntBASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 CR392000.1-201ENST00000624770 1228 ntBASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-4A0A0C4DH59 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC113410.3-201ENST00000623366 203 ntBASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 AL049637.2-201ENST00000641778 930 ntBASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-4A0A0C4DH59 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC008550.1-201ENST00000511500 884 ntBASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 CD177P1-201ENST00000606252 935 ntBASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 AL031985.4-201ENST00000642138 673 ntBASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRBV5-4A0A0C4DH59 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms