Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 MYCNOS-205ENST00000641950 531 ntBASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV18A0A075B6X5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV18A0A075B6X5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
TRAV18A0A075B6X5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 AC016405.3-201ENST00000607710 860 ntBASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV18A0A075B6X5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 KRT19P1-201ENST00000405746 1186 ntBASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 KRT18P14-201ENST00000534205 1250 ntBASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV18A0A075B6X5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms