Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL158801.5-201ENST00000623123 465 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 THAP12P9-201ENST00000503971 2360 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CNTN3Q9P232 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CNTN3Q9P232 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CNTN3Q9P232 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL033543.1-201ENST00000623440 13454 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CNTN3Q9P232 RNU6-777P-201ENST00000364265 104 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 SNORA51.2-201ENST00000364595 132 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 RPL7P58-201ENST00000402913 758 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 OR2W4P-201ENST00000406496 926 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL354751.2-201ENST00000415471 210 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL031663.1-201ENST00000437445 219 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 RPL7P54-201ENST00000438336 674 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 SEPT14P3-201ENST00000439401 183 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL732372.2-207ENST00000445840 183 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 ARPC3P5-201ENST00000448802 534 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 RPS23P9-201ENST00000448848 438 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 SEPT14P2-201ENST00000453405 183 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 ACA64.4-201ENST00000459070 127 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 SEPT14P4-201ENST00000513445 186 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 FO082796.1-201ENST00000523795 183 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC079600.1-201ENST00000550326 297 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC091078.2-201ENST00000557145 559 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC018638.8-201ENST00000588755 281 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC145423.1-201ENST00000605712 336 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AP005431.1-201ENST00000618479 319 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 AL160413.1-201ENST00000622780 310 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.4□□□□□ -1.38
CNTN3Q9P232 PARP4P2-201ENST00000446672 3326 ntBASIC6.4□□□□□ -1.38
CNTN3Q9P232 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CNTN3Q9P232 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CNTN3Q9P232 AC097504.1-201ENST00000515103 2415 ntBASIC6.4□□□□□ -1.39
CNTN3Q9P232 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CNTN3Q9P232 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CNTN3Q9P232 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CNTN3Q9P232 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CNTN3Q9P232 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CNTN3Q9P232 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CNTN3Q9P232 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CNTN3Q9P232 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 OR13C1P-202ENST00000641378 2919 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 OR9K1P-201ENST00000326513 941 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNTN3Q9P232 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 Y_RNA.166-201ENST00000363730 102 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 Y_RNA.326-201ENST00000365176 113 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 RPS3AP2-201ENST00000407190 754 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 RAD23BP1-201ENST00000421404 1227 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 SAR1AP4-201ENST00000429225 591 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.39□□□□□ -1.39
CNTN3Q9P232 CBX1P4-201ENST00000439415 457 ntBASIC6.39□□□□□ -1.39
CNTN3Q9P232 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms