Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 MTCO1P40-201ENST00000574371 625 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AP001542.2-201ENST00000593141 364 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC124856.1-201ENST00000600819 896 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AL355816.1-201ENST00000607951 118 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC010975.3-201ENST00000618727 978 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC004943.3-201ENST00000624116 600 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC090897.3-201ENST00000636973 1157 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 AC008758.3-201ENST00000507003 1829 ntBASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCKIPSDQ9NZQ3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC046144.1-201ENST00000478559 1853 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 ZNF876P-202ENST00000398732 1485 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 OR4K15-201ENST00000305051 1216 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 RNU1-94P-201ENST00000362627 173 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 RNA5SP505-201ENST00000364748 108 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 BMS1P3-201ENST00000372011 932 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 RPS7P9-201ENST00000414704 586 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 LUZP4P1-201ENST00000415420 344 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 TBCAP2-201ENST00000416175 326 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC009965.2-201ENST00000425328 970 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 NPM1P24-201ENST00000428039 894 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 C4BPAP2-201ENST00000428434 478 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AL589880.1-201ENST00000448271 287 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 RPL37P3-201ENST00000456825 293 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 RN7SL385P-201ENST00000468873 276 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC091951.3-201ENST00000504093 246 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 RN7SKP283-201ENST00000517197 270 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AP001880.2-201ENST00000538233 448 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC023813.2-201ENST00000564321 469 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC069366.1-201ENST00000583159 838 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC061975.8-201ENST00000587058 721 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 VN1R88P-201ENST00000596787 292 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC068790.7-201ENST00000602347 528 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC091057.2-201ENST00000602594 792 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC146944.4-201ENST00000602697 718 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC025165.5-201ENST00000602802 578 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 CR392039.4-201ENST00000624968 501 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC092608.3-201ENST00000625017 386 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 OR2L1P-202ENST00000641567 1023 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AL592182.3-201ENST00000642132 3304 ntBASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NCKIPSDQ9NZQ3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 NCLP2-201ENST00000416078 1462 ntBASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 OR5H2-201ENST00000355273 945 ntBASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 RNU1-83P-201ENST00000363426 164 ntBASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 RNU4-51P-201ENST00000364206 140 ntBASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.77□□□□□ -1.65
NCKIPSDQ9NZQ3 RNU6-224P-201ENST00000384055 107 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms