Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HIGD1AP8-201ENST00000453927 274 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 Y_RNA.653-201ENST00000459091 95 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 RN7SL382P-201ENST00000482631 282 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 RN7SL170P-201ENST00000487098 295 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 RPSAP51-201ENST00000497462 645 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 PTP4A1P6-201ENST00000531034 478 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AL121579.2-201ENST00000555466 590 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AL590032.1-201ENST00000604920 252 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AC062037.2-201ENST00000610137 73 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AL162373.1-201ENST00000620433 407 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 AC032011.1-201ENST00000611703 1549 ntBASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.54□□□□□ -1.36
CUEDC1Q9NWM3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AF287957.1-201ENST00000607368 1595 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AL591416.1-201ENST00000404015 867 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RPL31P52-201ENST00000407532 367 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 MIR548K-201ENST00000408406 116 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RNU6-193P-201ENST00000410977 107 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RN7SKP205-201ENST00000410999 307 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AL389925.1-201ENST00000432257 728 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RPL34P6-201ENST00000432390 345 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RPS15AP9-201ENST00000439856 381 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC104651.2-201ENST00000447549 528 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RPL37P23-201ENST00000492641 294 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RNA5SP116-201ENST00000516132 98 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC116917.1-201ENST00000520558 305 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 OR52K3P-201ENST00000531655 943 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AL137100.2-201ENST00000555786 315 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RN7SL753P-201ENST00000581238 290 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 MIR5690-201ENST00000583739 73 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC026898.1-201ENST00000586404 571 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC073539.2-201ENST00000597113 165 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC133104.2-201ENST00000615272 193 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 MIR6806-201ENST00000622141 64 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC120057.5-201ENST00000623840 154 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 MTND5P19-201ENST00000424872 1794 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 ZNF806-201ENST00000438300 1774 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms