Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BCAS3Q9H6U6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RNU6-1339P-201ENST00000363574 91 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RN7SKP103-201ENST00000363848 320 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RNA5SP428-201ENST00000365129 132 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 SNORA56-201ENST00000383966 129 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 Y_RNA.408-201ENST00000383987 102 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 MIR525-201ENST00000384978 85 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RNU6-77P-201ENST00000410554 91 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 Z97055.1-201ENST00000419730 712 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC245054.1-201ENST00000420944 258 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RWDD4P2-201ENST00000426392 563 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RPL7AP49-201ENST00000429522 581 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AL591438.1-201ENST00000433508 581 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RPL19P16-201ENST00000433839 588 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 RPS25P9-201ENST00000435591 252 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 TMX2P1-201ENST00000436507 708 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 KNOP1P3-201ENST00000446933 426 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 NANOGNBP1-201ENST00000448444 480 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 EPS15P1-201ENST00000448836 336 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 OR6C5P-201ENST00000452388 923 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AMD1P1-201ENST00000457220 922 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 FTH1P2-201ENST00000466086 412 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC073522.1-201ENST00000483312 377 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC023424.2-201ENST00000493479 777 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AP001804.2-201ENST00000533932 910 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC025260.1-201ENST00000548858 430 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 MIR3934-201ENST00000579806 107 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 FAM106CP-201ENST00000582212 507 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 FGF7P1-201ENST00000582820 288 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 MEMO1P5-201ENST00000604810 406 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 MIR6839-201ENST00000620425 113 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC091905.4-201ENST00000623432 202 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 U6.107-201ENST00000637108 79 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 AL079343.1-201ENST00000572358 1771 ntBASIC5.78□□□□□ -1.48
BCAS3Q9H6U6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
BCAS3Q9H6U6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 SAMMSON-210ENST00000641260 1308 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms