Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
RTFDC1Q9BY42 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RTFDC1Q9BY42 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
RTFDC1Q9BY42 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 RNU6-560P-201ENST00000364007 108 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 SNORA70C-201ENST00000384538 135 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AL049545.1-201ENST00000401856 572 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 RPL21P108-201ENST00000413857 481 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AL358176.3-201ENST00000420757 454 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 RPS26P47-201ENST00000427219 348 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MTCO2P20-201ENST00000437339 673 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MTCO2P25-201ENST00000447065 681 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AC084024.2-201ENST00000503480 791 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MYL12BP2-201ENST00000503948 512 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AC093755.1-201ENST00000512950 1023 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 RNU6-488P-201ENST00000515918 99 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 RNU5A-4P-201ENST00000516588 111 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 RPL23AP53-201ENST00000521854 457 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MTATP6P15-201ENST00000527233 835 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MRPS36P5-201ENST00000551909 298 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 DPRXP4-201ENST00000578053 568 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AC093227.2-201ENST00000589357 285 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AL390816.3-201ENST00000604527 1066 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 AC024941.1-201ENST00000612250 334 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTFDC1Q9BY42 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 SAMMSON-213ENST00000641336 1521 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 SNORA71.2-201ENST00000364941 134 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 RNU6-1242P-201ENST00000391052 103 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AL031736.2-201ENST00000426573 787 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC004865.1-201ENST00000442276 1003 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 CDC27P1-201ENST00000445384 715 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 EEF1A1P1-201ENST00000447052 739 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 EIF4A1P11-201ENST00000451239 222 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 SCARNA10-201ENST00000459255 330 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC108734.3-201ENST00000481241 1165 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 SLC25A15P5-201ENST00000508033 253 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 CYCSP29-201ENST00000533731 318 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AP000619.3-201ENST00000535634 1127 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC025884.1-201ENST00000556034 378 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC017100.2-201ENST00000584628 355 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 BNIP3P26-201ENST00000600827 554 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 VN1R85P-201ENST00000601587 426 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 DPRXP5-201ENST00000604662 539 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AL392048.1-201ENST00000613946 534 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AL023881.1-201ENST00000621088 301 ntBASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms