Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 BTF3P5-201ENST00000457252 467 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 RPL23AP12-201ENST00000467573 473 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 AC010342.1-201ENST00000514047 877 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 RNA5SP154-201ENST00000516193 111 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 GNG5P1-201ENST00000255500 204 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 HSFY4P-201ENST00000415994 1181 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 RPL37P3-201ENST00000456825 293 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 UBE2DNL-203ENST00000474922 222 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AC010285.3-201ENST00000511668 676 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AC090337.1-201ENST00000579651 2074 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 SNORA38.1-201ENST00000364172 131 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 Y_RNA.500-201ENST00000384466 111 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AC008638.3-201ENST00000603341 463 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AL591424.2-201ENST00000617023 128 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AC099654.11-201ENST00000638857 294 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 AC073869.7-201ENST00000640874 297 ntBASIC5.57□□□□□ -1.52
SCAPERQ9BY12 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 LINC01109-201ENST00000603837 3081 ntBASIC5.56□□□□□ -1.52
SCAPERQ9BY12 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 AC007685.1-201ENST00000329806 452 ntBASIC5.56□□□□□ -1.52
SCAPERQ9BY12 RNA5SP52-201ENST00000362448 134 ntBASIC5.56□□□□□ -1.52
SCAPERQ9BY12 AC002524.1-201ENST00000411687 547 ntBASIC5.56□□□□□ -1.52
SCAPERQ9BY12 OR51A6P-201ENST00000418680 1004 ntBASIC5.56□□□□□ -1.52
SCAPERQ9BY12 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 AC006116.10-201ENST00000591836 581 ntBASIC5.56□□□□□ -1.52
SCAPERQ9BY12 AC068020.1-201ENST00000594215 661 ntBASIC5.56□□□□□ -1.52
SCAPERQ9BY12 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.56□□□□□ -1.52
SCAPERQ9BY12 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCAPERQ9BY12 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCAPERQ9BY12 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.55□□□□□ -1.52
SCAPERQ9BY12 RHOT1P2-201ENST00000366423 333 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 MIR93-201ENST00000385024 80 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 BX119904.1-201ENST00000432026 348 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 AC025518.1-201ENST00000479856 347 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 AC017037.1-201ENST00000508460 471 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 FTH1P9-201ENST00000513251 355 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 UBTFL9-201ENST00000534504 1148 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 EIF4BP1-201ENST00000554881 351 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 GNRHR2P1-201ENST00000555315 631 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 MIR4325-201ENST00000583049 90 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 AL669942.2-201ENST00000620352 697 ntBASIC5.55□□□□□ -1.52
SCAPERQ9BY12 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.55□□□□□ -1.52
SCAPERQ9BY12 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.55□□□□□ -1.52
SCAPERQ9BY12 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 BDP1P-201ENST00000582658 1990 ntBASIC5.54□□□□□ -1.52
SCAPERQ9BY12 Y_RNA.510-201ENST00000384511 114 ntBASIC5.54□□□□□ -1.52
SCAPERQ9BY12 RNA5SP424-201ENST00000390988 115 ntBASIC5.54□□□□□ -1.52
SCAPERQ9BY12 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 RPL31P61-201ENST00000496160 376 ntBASIC5.54□□□□□ -1.52
SCAPERQ9BY12 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms