Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC010338.1-201ENST00000621823 717 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 CRYM-AS1-204ENST00000637983 556 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC119674.1-212ENST00000641155 993 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AL161912.4-201ENST00000623889 2468 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC005294.1-201ENST00000355509 281 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-433P-201ENST00000363216 104 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-532P-201ENST00000384318 107 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 MIR217-201ENST00000384817 110 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC005042.1-201ENST00000393397 800 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RN7SKP17-201ENST00000411242 351 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RPS6P23-201ENST00000413224 722 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 METTL15P3-201ENST00000415522 1221 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 NPM1P24-201ENST00000428039 894 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 CYCSP6-201ENST00000434498 302 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 OR6D1P-201ENST00000436165 939 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 CYCSP11-201ENST00000436426 315 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RN7SL222P-201ENST00000476452 299 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RN7SL97P-201ENST00000486780 299 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC072052.1-201ENST00000496556 306 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC018710.1-201ENST00000506509 158 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 MTCO1P35-201ENST00000515270 228 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 Y_RNA.704-201ENST00000516851 102 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 MTND1P35-201ENST00000526739 508 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC126177.5-201ENST00000549599 178 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC090220.1-201ENST00000593078 1699 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC019193.2-201ENST00000610012 634 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AL121612.2-201ENST00000612261 482 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 FRG1KP-201ENST00000623592 341 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC137056.2-201ENST00000624055 1958 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC068880.5-201ENST00000624331 290 ntBASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNGAP1Q96PV0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-877P-201ENST00000383868 107 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-98P-201ENST00000384173 107 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RNU1-77P-201ENST00000390868 162 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RPL23AP29-201ENST00000397284 453 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 TMSB4XP8-201ENST00000402089 135 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AL589647.1-201ENST00000402485 466 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 GSTA9P-201ENST00000406231 611 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 TMSB4XP6-201ENST00000415187 135 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 C1DP2-201ENST00000418167 426 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 USP9YP27-201ENST00000418455 438 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 LINC00993-201ENST00000420453 540 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 TMSB4XP1-201ENST00000424567 135 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AL513175.1-201ENST00000431492 780 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms