Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC009094.1-201ENST00000564443 426 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AP003392.5-201ENST00000607857 415 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC012414.7-202ENST00000622705 1090 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AF001550.2-201ENST00000636643 217 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 SMG1P6-201ENST00000532337 2930 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 OR51H2P-202ENST00000641424 3046 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC010928.1-201ENST00000592477 1447 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 SNORD65.1-201ENST00000390889 71 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AL049545.1-201ENST00000401856 572 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC019050.1-201ENST00000418508 492 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 MRPS36P1-201ENST00000421291 307 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 USP9YP31-201ENST00000431405 881 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 SEPT7P5-201ENST00000434048 306 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 RPS26P2-201ENST00000440331 348 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 MTATP6P26-201ENST00000445926 662 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 RPS27AP15-201ENST00000447672 466 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 PNPLA4P1-201ENST00000458328 305 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 RNA5SP135-201ENST00000517019 125 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AF279873.1-201ENST00000523393 313 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC010198.2-201ENST00000550612 259 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AL049839.1-201ENST00000556151 657 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AL354943.1-201ENST00000572103 781 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC124856.1-201ENST00000600819 896 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AP000255.1-201ENST00000610276 676 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC124312.6-202ENST00000623624 418 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 AC008758.3-201ENST00000507003 1829 ntBASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHMP4CQ96CF2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AC006971.1-201ENST00000407916 4486 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RNU6-560P-201ENST00000364007 108 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RNU6-83P-201ENST00000384568 112 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RNU6-1151P-201ENST00000384684 107 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 TAF9BP1-201ENST00000396646 746 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AL359643.1-201ENST00000404109 423 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 U3.35-201ENST00000408405 208 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RPL23AP76-201ENST00000441860 458 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RPL7P59-201ENST00000447700 943 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RN7SL354P-201ENST00000469282 294 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RPL23AP72-201ENST00000492447 435 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AC119751.5-201ENST00000514077 770 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms