Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL451139.1-201ENST00000434718 346 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 AC005019.1-201ENST00000436455 431 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 SUMO2P3-201ENST00000438311 288 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC021382.1-201ENST00000483523 359 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 RPL12P30-201ENST00000488389 499 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC078899.1-201ENST00000521432 1185 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.97□□□□□ -1.29
HLA-CQ95604 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 U2.1-201ENST00000618978 145 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 AL596245.1-201ENST00000618994 362 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 MIR6730-201ENST00000622213 67 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 U6.114-201ENST00000636407 96 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.97□□□□□ -1.29
HLA-CQ95604 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.96□□□□□ -1.29
HLA-CQ95604 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
HLA-CQ95604 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 AC123769.1-201ENST00000530992 3192 ntBASIC6.96□□□□□ -1.29
HLA-CQ95604 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 AC005614.1-201ENST00000598952 3653 ntBASIC6.96□□□□□ -1.29
HLA-CQ95604 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
HLA-CQ95604 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
HLA-CQ95604 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
HLA-CQ95604 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.29
HLA-CQ95604 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
HLA-CQ95604 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HLA-CQ95604 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-CQ95604 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-CQ95604 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-CQ95604 Y_RNA.234-201ENST00000364409 97 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.96□□□□□ -1.3
HLA-CQ95604 RNU6-641P-201ENST00000384006 107 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RNU6-890P-201ENST00000384121 107 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 SNORA51.9-201ENST00000384295 124 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RNU6-1109P-201ENST00000391187 107 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 SNORA75.6-201ENST00000391318 127 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 HMGB3P7-201ENST00000400214 611 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-CQ95604 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 POLHP1-201ENST00000411806 470 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RPL31P45-201ENST00000419532 356 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AC083862.1-201ENST00000427378 1242 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 AL669831.1-202ENST00000428504 417 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-CQ95604 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-CQ95604 GAPDHP23-201ENST00000444823 993 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 VPS25P1-201ENST00000455691 508 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 AC004801.2-202ENST00000463559 283 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RN7SL717P-201ENST00000478343 297 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 VN1R104P-201ENST00000505115 1009 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RNU6-475P-201ENST00000516073 104 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RNU6-1038P-201ENST00000516516 104 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RNU6-789P-201ENST00000517105 102 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 IGKV3D-25-201ENST00000519599 235 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AC022360.1-201ENST00000521058 340 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-CQ95604 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HLA-CQ95604 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.96□□□□□ -1.3
HLA-CQ95604 AL683813.2-201ENST00000605245 502 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 SDR42E1P1-201ENST00000611327 477 ntBASIC6.96□□□□□ -1.3
HLA-CQ95604 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.96□□□□□ -1.3
HLA-CQ95604 FAM157A-202ENST00000615155 405 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms