Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC005832.2-201ENST00000538921 1430 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 LINC01355-201ENST00000566551 5444 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ERCC4Q92889 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC4Q92889 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
ERCC4Q92889 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ERCC4Q92889 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ERCC4Q92889 SNORA2.3-201ENST00000383920 135 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.72□□□□□ -1.49
ERCC4Q92889 OR51A3P-201ENST00000413596 924 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 UBE2V1P10-201ENST00000414685 269 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 RAD23BP2-201ENST00000416003 1207 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC013429.2-201ENST00000418798 781 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC4Q92889 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.72□□□□□ -1.49
ERCC4Q92889 SEPT7P5-201ENST00000434048 306 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.72□□□□□ -1.49
ERCC4Q92889 AP000936.3-201ENST00000438127 255 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AL645937.3-201ENST00000453647 936 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 MTCYBP1-201ENST00000454315 1119 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.72□□□□□ -1.49
ERCC4Q92889 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.72□□□□□ -1.49
ERCC4Q92889 AC004069.2-201ENST00000505438 1114 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 SCARNA21.2-201ENST00000516600 166 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC4Q92889 AC134698.4-201ENST00000523451 826 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC4Q92889 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC4Q92889 AC005868.1-201ENST00000536421 331 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.72□□□□□ -1.49
ERCC4Q92889 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.72□□□□□ -1.49
ERCC4Q92889 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 EIF1P4-201ENST00000572664 335 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 ROCK1P1-201ENST00000573767 549 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 BPTFP1-201ENST00000579209 492 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 MIR3611-201ENST00000584484 83 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC107982.3-201ENST00000584957 985 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 AC090525.3-201ENST00000605601 189 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC018695.5-201ENST00000605872 315 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AL139286.2-201ENST00000606838 396 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC004948.1-201ENST00000609858 672 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AL353726.1-201ENST00000614041 1000 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AL121873.1-201ENST00000616013 524 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.72□□□□□ -1.49
ERCC4Q92889 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.72□□□□□ -1.49
ERCC4Q92889 AL672167.1-203ENST00000641299 2975 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ERCC4Q92889 AL034370.1-201ENST00000397254 1590 ntBASIC5.72□□□□□ -1.49
ERCC4Q92889 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ERCC4Q92889 AC093775.1-201ENST00000624154 1868 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC4Q92889 PANDAR-201ENST00000629595 1506 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AL359643.1-201ENST00000404109 423 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC4Q92889 AL391361.1-201ENST00000405580 489 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 MIR1303-201ENST00000408625 86 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 RNU2-16P-201ENST00000410712 136 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AL663109.1-201ENST00000411498 844 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 TPT1P2-201ENST00000413105 503 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 MTCO2P34-201ENST00000421994 607 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ERCC4Q92889 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 MTCYBP39-201ENST00000437562 491 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC092641.1-201ENST00000440229 772 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 SPRYD7P1-201ENST00000443861 570 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 DDX39BP2-208ENST00000453923 258 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC4Q92889 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC108693.1-201ENST00000496068 432 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AL035404.1-201ENST00000497982 568 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 RPS4XP20-201ENST00000505751 772 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC079140.3-201ENST00000511111 550 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC091965.2-201ENST00000512324 613 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 AC105031.1-201ENST00000518550 476 ntBASIC5.71□□□□□ -1.5
ERCC4Q92889 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC4Q92889 AP000873.5-201ENST00000533906 236 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms