Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC092436.1-201ENST00000506450 503 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 GAPDHP62-201ENST00000515313 990 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC078899.1-201ENST00000521432 1185 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC092470.1-201ENST00000546187 132 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC018552.1-201ENST00000562099 811 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 MIR4703-201ENST00000577728 79 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC123786.2-201ENST00000603459 275 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 APOOP1-201ENST00000604695 592 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC016925.2-201ENST00000605108 242 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL592436.1-201ENST00000605135 558 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC007546.1-201ENST00000619452 559 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC211433.3-201ENST00000623770 375 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 MTND4LP32-201ENST00000636111 270 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AP002370.1-201ENST00000528055 1602 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC093775.1-201ENST00000624154 1868 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 Z95327.2-201ENST00000414579 1873 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 MTCO1P12-201ENST00000414273 1543 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RNA5SP302-201ENST00000364896 100 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RNU6-639P-201ENST00000384074 107 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AL359643.1-201ENST00000404109 423 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AL672212.1-201ENST00000422246 400 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RPS7P4-201ENST00000444127 582 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RPSAP7-201ENST00000456871 885 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RNU7-66P-201ENST00000459469 62 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RPS4XP10-201ENST00000465034 731 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 SIAH1P1-201ENST00000479411 923 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 RNA5SP503-201ENST00000517047 117 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC103843.2-201ENST00000530523 682 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 EEF1B2P1-201ENST00000567221 672 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC011193.2-201ENST00000582638 367 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC005070.2-201ENST00000604391 260 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AC124303.1-201ENST00000605703 360 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 AL121985.3-201ENST00000620690 523 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
DEPDC4Q8N2C3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC062029.1-202ENST00000606164 3651 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC009951.1-201ENST00000623674 2614 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC022034.1-201ENST00000512867 2156 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms