Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.65□□□□□ -1.66
PRPF39Q86UA1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRPF39Q86UA1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.65□□□□□ -1.66
PRPF39Q86UA1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RNU5B-4P-201ENST00000363508 111 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 SNORA70.2-201ENST00000364506 135 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RNU6-1293P-201ENST00000384077 107 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 ELOCP19-201ENST00000411919 318 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC011242.1-201ENST00000433596 1158 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC234064.1-201ENST00000436312 247 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC073143.1-201ENST00000436316 395 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC000041.1-201ENST00000439655 175 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 SEPT14P24-201ENST00000447236 180 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AP001781.1-201ENST00000530977 207 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC074029.1-201ENST00000552531 1044 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC084783.1-201ENST00000565846 910 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC008507.2-201ENST00000588402 1176 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RPL7P50-201ENST00000600588 727 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 RNU6-156P-201ENST00000621869 107 ntBASIC4.65□□□□□ -1.67
PRPF39Q86UA1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF39Q86UA1 OR14L1P-202ENST00000641545 3009 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC022893.2-201ENST00000564832 3296 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC115285.1-201ENST00000424879 736 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 RPEP3-201ENST00000425462 676 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 RPS7P2-201ENST00000435134 607 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL050341.1-201ENST00000447743 313 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL162388.1-201ENST00000450912 352 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 RNU7-140P-201ENST00000459546 60 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC068587.1-201ENST00000483613 781 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC015795.1-201ENST00000513669 327 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AP003066.2-201ENST00000529375 555 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC023825.1-201ENST00000566704 1030 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC017100.2-201ENST00000584628 355 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 HMGB2P1-201ENST00000591146 634 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC099785.1-201ENST00000605697 437 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL359535.1-201ENST00000612100 1087 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 VN1R74P-201ENST00000613259 503 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AL121873.1-201ENST00000616013 524 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.64□□□□□ -1.67
PRPF39Q86UA1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms