Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC018688.1-201ENST00000636528 1754 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 SNORD81.1-201ENST00000363064 77 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 Y_RNA.240-201ENST00000364469 95 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 RN7SKP130-201ENST00000364924 301 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 LDHAP5-201ENST00000394996 622 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 RPS17P17-201ENST00000419392 409 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AL139095.3-201ENST00000419672 1203 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC007365.2-201ENST00000428806 458 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 RPL3P11-201ENST00000434028 1146 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 RPL36AP15-201ENST00000444514 266 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 RPL23AP43-201ENST00000446445 471 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC073909.1-201ENST00000447112 999 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 OR7E116P-201ENST00000448529 957 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AL136981.1-203ENST00000451452 3844 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 FPGT-203ENST00000467578 601 ntTSL 2 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC034114.1-201ENST00000520293 285 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 SAA3P-201ENST00000533267 365 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC244034.2-201ENST00000562504 509 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 MIR5692C1-201ENST00000585309 91 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC011477.5-201ENST00000586571 259 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AL512782.1-201ENST00000603093 364 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC073046.2-201ENST00000604756 527 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AL021918.2-201ENST00000613415 194 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AL161423.1-201ENST00000613700 262 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 AC211486.4-201ENST00000621495 113 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.51□□□□□ -1.21
VARS2Q5ST30 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARS2Q5ST30 AL359396.1-201ENST00000623151 2376 ntBASIC7.51□□□□□ -1.21
VARS2Q5ST30 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 RNU6-658P-201ENST00000384606 106 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 AP003170.5-201ENST00000397185 335 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 RPL23AP25-201ENST00000430973 463 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 CEACAMP9-201ENST00000442990 513 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 AL031584.1-201ENST00000447169 754 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 AL445466.1-201ENST00000448432 357 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 RPL17P19-201ENST00000489069 552 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 RPS4XP14-201ENST00000493072 781 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 AP001086.1-201ENST00000494882 321 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 EIF3KP3-201ENST00000514461 639 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 RNU6-1338P-201ENST00000516328 91 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 PMS2P3-207ENST00000529061 717 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 AC109446.1-201ENST00000566172 220 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 AC024267.2-201ENST00000582737 417 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 MAGOH2P-202ENST00000584384 429 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 AC011921.2-201ENST00000589465 152 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 OR4G2P-202ENST00000641004 1759 ntBASIC7.5□□□□□ -1.21
VARS2Q5ST30 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
VARS2Q5ST30 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARS2Q5ST30 AL359263.1-201ENST00000441188 2796 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms