Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC069285.2-201ENST00000440210 275 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 KNOP1P3-201ENST00000446933 426 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 PGBD4P4-201ENST00000509673 613 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC38Q502W7 RN7SKP260-201ENST00000516907 149 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 Y_RNA.717-201ENST00000517106 92 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 Y_RNA.719-201ENST00000517156 106 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 MTCO2P15-201ENST00000532655 656 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC38Q502W7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC38Q502W7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 MTCYBP27-201ENST00000555160 670 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC087477.6-201ENST00000559595 843 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC074051.3-201ENST00000570238 358 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC022662.1-201ENST00000580252 331 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC069366.1-201ENST00000583159 838 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AL021707.7-201ENST00000607991 416 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC140725.3-201ENST00000616193 880 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC011330.2-201ENST00000621680 635 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AP002782.1-201ENST00000623107 614 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC026634.1-201ENST00000634369 198 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC015813.6-201ENST00000624409 5808 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 MTND4P26-201ENST00000415971 1359 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC38Q502W7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AL049555.1-201ENST00000562834 1933 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 FCF1P5-201ENST00000406490 482 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 RN7SKP273-201ENST00000411392 314 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 BMS1P13-201ENST00000417301 885 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 BOLA3P4-201ENST00000418151 400 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 KRR1P1-201ENST00000419430 803 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 FABP7P1-201ENST00000424004 391 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 RPL7P44-201ENST00000424827 742 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC005033.1-201ENST00000428904 813 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 USP9YP31-201ENST00000431405 881 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 RFC5P1-201ENST00000454419 874 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 RPS20P21-201ENST00000466859 343 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 RNA5SP43-201ENST00000516559 110 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 ARL2BPP5-201ENST00000523141 481 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC023050.2-201ENST00000544968 387 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 GTF2IP8-201ENST00000560687 584 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC124068.1-201ENST00000563131 678 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 BNIP3P26-201ENST00000600827 554 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC007349.4-201ENST00000608114 532 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AC008147.4-201ENST00000617570 1204 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 AL359922.3-201ENST00000624779 1670 ntBASIC5.01□□□□□ -1.61
CCDC38Q502W7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC38Q502W7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC38Q502W7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms