Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC01963-201ENST00000562038 3148 ntBASIC4.9□□□□□ -1.62
NKX6-1P78426 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NKX6-1P78426 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
NKX6-1P78426 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NKX6-1P78426 AP001029.2-203ENST00000589795 4910 ntBASIC4.9□□□□□ -1.62
NKX6-1P78426 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NKX6-1P78426 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NKX6-1P78426 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX6-1P78426 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AC103591.2-201ENST00000265259 766 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX6-1P78426 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX6-1P78426 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NKX6-1P78426 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NKX6-1P78426 RNA5SP91-201ENST00000390902 119 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC005042.1-201ENST00000393397 800 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 RN7SKP279-201ENST00000411383 298 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 PGBD4P8-201ENST00000412993 562 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 HMGB1P11-201ENST00000413899 637 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 MTCO3P41-201ENST00000414801 328 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 NUP35P2-201ENST00000416748 943 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 SLC35E1P1-201ENST00000419313 864 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX6-1P78426 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 CYCSP46-201ENST00000423569 204 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 DLGAP5P1-201ENST00000430307 464 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 RPL7L1P9-201ENST00000431298 745 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 KCTD10P1-201ENST00000434203 625 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL138878.2-201ENST00000440581 1241 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 TRIM60P18-201ENST00000441518 828 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AC091685.2-201ENST00000454924 864 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX6-1P78426 MEMO1P3-201ENST00000459811 302 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 RPL30P9-201ENST00000465586 330 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX6-1P78426 RPS4XP1-201ENST00000482189 787 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AC110792.2-201ENST00000510278 224 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AC104057.1-201ENST00000515547 497 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AL049779.2-201ENST00000553847 315 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX6-1P78426 HSPE1P3-201ENST00000559254 309 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC005951.1-201ENST00000576706 485 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 MIR4512-201ENST00000583257 77 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL513327.3-201ENST00000602618 469 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC025165.5-201ENST00000602802 578 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC115286.1-201ENST00000604298 434 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL133481.2-203ENST00000607558 139 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC107214.2-201ENST00000608204 634 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX6-1P78426 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC090116.1-201ENST00000615679 446 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL122125.1-201ENST00000616999 600 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC090510.2-201ENST00000617465 629 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX6-1P78426 AL356121.2-201ENST00000624715 780 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC025048.6-202ENST00000627667 438 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AL392088.2-201ENST00000637607 285 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 SAMMSON-213ENST00000641336 1521 ntBASIC4.9□□□□□ -1.63
NKX6-1P78426 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NKX6-1P78426 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NKX6-1P78426 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX6-1P78426 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NKX6-1P78426 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX6-1P78426 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX6-1P78426 AL031985.3-201ENST00000565390 2449 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC135352.1-201ENST00000506173 1418 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 AL121657.1-201ENST00000327215 531 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 RNU6-433P-201ENST00000363216 104 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 RNU4-91P-201ENST00000364778 135 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms