Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC020978.9-201ENST00000624380 1141 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.6□□□□□ -1.67
CCNA1P78396 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.6□□□□□ -1.67
CCNA1P78396 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.6□□□□□ -1.67
CCNA1P78396 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNA1P78396 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCNA1P78396 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.6□□□□□ -1.67
CCNA1P78396 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNA1P78396 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCNA1P78396 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCNA1P78396 HMGB3P19-201ENST00000403971 560 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 ZNF602P-201ENST00000405929 924 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 RPL23AP83-201ENST00000434984 473 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.59□□□□□ -1.67
CCNA1P78396 OR7L1P-201ENST00000456181 380 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNA1P78396 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNA1P78396 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNA1P78396 RNA5SP179-201ENST00000517284 121 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AC026403.1-201ENST00000518938 295 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 DUXAP2-201ENST00000519198 589 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNA1P78396 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.59□□□□□ -1.67
CCNA1P78396 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNA1P78396 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNA1P78396 NPM1P47-201ENST00000560843 856 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AC090229.1-201ENST00000590983 1609 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AC010680.3-201ENST00000604215 520 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AL391497.1-201ENST00000608671 547 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AC026368.1-201ENST00000614934 690 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AL391261.4-201ENST00000616012 481 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AC019080.5-201ENST00000624891 757 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AC009452.1-201ENST00000640823 606 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 AL596275.2-204ENST00000641628 552 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCNA1P78396 AL596275.2-206ENST00000641957 626 ntBASIC4.59□□□□□ -1.67
CCNA1P78396 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.59□□□□□ -1.68
CCNA1P78396 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.59□□□□□ -1.68
CCNA1P78396 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.59□□□□□ -1.68
CCNA1P78396 ZNF285B-201ENST00000561698 1767 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNA1P78396 AP002001.2-201ENST00000529025 1469 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 GSTA12P-201ENST00000402398 508 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 RPS23P10-201ENST00000416185 486 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 Z97055.1-201ENST00000419730 712 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 AC092647.1-201ENST00000420654 287 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 PRSS3P4-201ENST00000453323 162 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 AL645939.1-201ENST00000453429 797 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 CYCSP53-201ENST00000455540 265 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 EIF2S2P4-201ENST00000461070 984 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 PPIAP15-201ENST00000479662 484 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNA1P78396 AC006499.6-201ENST00000511169 607 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 AC093853.1-201ENST00000515689 483 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 RNU1-95P-201ENST00000516357 160 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 RNU1-128P-201ENST00000516704 160 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNA1P78396 AC008083.2-201ENST00000546707 476 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.58□□□□□ -1.68
CCNA1P78396 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.58□□□□□ -1.68
CCNA1P78396 MIR4458-201ENST00000578872 75 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 AC091167.4-201ENST00000605079 184 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 HMGB1P51-201ENST00000605166 638 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNA1P78396 AL139089.1-201ENST00000620372 975 ntBASIC4.58□□□□□ -1.68
CCNA1P78396 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNA1P78396 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNA1P78396 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNA1P78396 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNA1P78396 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNA1P78396 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNA1P78396 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNA1P78396 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNA1P78396 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.57□□□□□ -1.68
CCNA1P78396 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.57□□□□□ -1.68
CCNA1P78396 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.57□□□□□ -1.68
CCNA1P78396 LINC00561-201ENST00000565815 2738 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCNA1P78396 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AC013404.1-201ENST00000413068 249 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 ARL4AP3-201ENST00000441452 574 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 PDSS1P2-201ENST00000449397 678 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.57□□□□□ -1.68
CCNA1P78396 NANOGP10-201ENST00000453325 895 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 RPL21P11-201ENST00000461458 483 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AC022795.1-201ENST00000473808 480 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 RN7SL271P-201ENST00000487601 295 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AC006499.5-201ENST00000505037 514 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 HMGB3P13-201ENST00000511263 607 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.57□□□□□ -1.68
CCNA1P78396 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.57□□□□□ -1.68
CCNA1P78396 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCNA1P78396 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms