Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RHBDL3P58872 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AP000580.1-201ENST00000404439 358 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 BTBD10P2-201ENST00000404779 676 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 MTCO3P31-201ENST00000405526 789 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC004987.3-201ENST00000413879 771 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDL3P58872 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDL3P58872 MTCO1P3-201ENST00000429327 192 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 B3GNT2P1-201ENST00000434960 952 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 YWHAZP8-201ENST00000436935 731 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AC011276.1-201ENST00000469688 323 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 VPS26AP1-201ENST00000483197 979 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC083829.1-201ENST00000503756 657 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AC093752.1-206ENST00000511823 336 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDL3P58872 RNA5SP230-201ENST00000517039 122 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AP000827.1-201ENST00000527814 258 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 MTND2P26-201ENST00000528255 1029 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDL3P58872 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.51□□□□□ -1.53
RHBDL3P58872 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 AL359219.2-201ENST00000555184 348 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDL3P58872 MIR5708-201ENST00000579723 85 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDL3P58872 AC010680.4-201ENST00000605334 543 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AP003117.2-201ENST00000606010 545 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 MLECP1-201ENST00000615893 709 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC099669.2-201ENST00000616549 437 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 CYCSP41-201ENST00000616920 296 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AL157770.1-201ENST00000623049 439 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC090506.2-201ENST00000624521 419 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC000367.1-201ENST00000452711 1766 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 AC100778.3-201ENST00000580060 1750 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 SAGE4P-201ENST00000442271 3381 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 AL672167.1-205ENST00000641112 3080 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 AL122126.1-201ENST00000546905 1318 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 AC073136.1-201ENST00000449426 2884 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 RNA5SP509-201ENST00000364577 119 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 SNORA71.2-201ENST00000364941 134 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RHBDL3P58872 AL139098.1-201ENST00000407291 389 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 AC069218.2-201ENST00000411665 344 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 Z75741.2-201ENST00000417272 1167 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.5□□□□□ -1.53
RHBDL3P58872 DPRXP1-201ENST00000426312 460 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 RWDD4P2-201ENST00000426392 563 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 AC096632.1-201ENST00000427395 310 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.5□□□□□ -1.53
RHBDL3P58872 AC092393.1-201ENST00000439625 742 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 AC090686.1-201ENST00000481577 749 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 BOLA3P3-201ENST00000505182 232 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 RN7SKP234-201ENST00000517173 224 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 ARL2BPP5-201ENST00000523141 481 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.5□□□□□ -1.53
RHBDL3P58872 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.5□□□□□ -1.53
RHBDL3P58872 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RHBDL3P58872 MIR6830-201ENST00000636015 70 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 MIR6715B-201ENST00000637172 77 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RHBDL3P58872 MFSD8-245ENST00000641743 948 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 MTND5P31-201ENST00000419366 1374 ntBASIC5.5□□□□□ -1.53
RHBDL3P58872 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDL3P58872 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDL3P58872 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RHBDL3P58872 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms