Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC125611.1-201ENST00000549563 229 ntBASIC5.11□□□□□ -1.59
COPAP53621 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.11□□□□□ -1.59
COPAP53621 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.11□□□□□ -1.59
COPAP53621 AC063949.1-201ENST00000552900 865 ntBASIC5.11□□□□□ -1.59
COPAP53621 AC069304.3-201ENST00000603938 1084 ntBASIC5.11□□□□□ -1.59
COPAP53621 AC018695.5-201ENST00000605872 315 ntBASIC5.11□□□□□ -1.59
COPAP53621 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.11□□□□□ -1.59
COPAP53621 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
COPAP53621 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPAP53621 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
COPAP53621 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.11□□□□□ -1.59
COPAP53621 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.11□□□□□ -1.59
COPAP53621 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 Z99496.1-201ENST00000469424 1477 ntBASIC5.11□□□□□ -1.59
COPAP53621 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 AL353743.4-201ENST00000422653 1547 ntBASIC5.11□□□□□ -1.59
COPAP53621 AC134882.1-201ENST00000603738 1676 ntBASIC5.11□□□□□ -1.59
COPAP53621 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPAP53621 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.1□□□□□ -1.59
COPAP53621 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.1□□□□□ -1.59
COPAP53621 AL512646.1-201ENST00000269395 1077 ntBASIC5.1□□□□□ -1.59
COPAP53621 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 Y_RNA.192-201ENST00000363977 102 ntBASIC5.1□□□□□ -1.59
COPAP53621 RNU6-560P-201ENST00000364007 108 ntBASIC5.1□□□□□ -1.59
COPAP53621 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 SNORD65.1-201ENST00000390889 71 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC013442.1-201ENST00000397347 228 ntBASIC5.1□□□□□ -1.59
COPAP53621 RPL36AP10-201ENST00000421785 322 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.1□□□□□ -1.59
COPAP53621 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 RPS26P40-201ENST00000435209 294 ntBASIC5.1□□□□□ -1.59
COPAP53621 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 KATNBL1P3-201ENST00000443475 909 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC104978.1-201ENST00000449387 391 ntBASIC5.1□□□□□ -1.59
COPAP53621 TCEA1P1-201ENST00000449716 880 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC234781.3-201ENST00000452540 973 ntBASIC5.1□□□□□ -1.59
COPAP53621 ART2BP-201ENST00000453501 499 ntBASIC5.1□□□□□ -1.59
COPAP53621 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 AC006511.1-201ENST00000470614 315 ntBASIC5.1□□□□□ -1.59
COPAP53621 OR52A4P-201ENST00000472867 958 ntBASIC5.1□□□□□ -1.59
COPAP53621 RN7SL860P-201ENST00000473738 223 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC108734.3-201ENST00000481241 1165 ntBASIC5.1□□□□□ -1.59
COPAP53621 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 AC117522.2-201ENST00000510049 657 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC048346.1-201ENST00000510247 144 ntBASIC5.1□□□□□ -1.59
COPAP53621 NDUFB4P12-201ENST00000513465 390 ntBASIC5.1□□□□□ -1.59
COPAP53621 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.1□□□□□ -1.59
COPAP53621 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 AP003461.1-201ENST00000528866 78 ntBASIC5.1□□□□□ -1.59
COPAP53621 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.1□□□□□ -1.59
COPAP53621 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 AC004217.3-201ENST00000551552 878 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.1□□□□□ -1.59
COPAP53621 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 BNIP3P26-201ENST00000600827 554 ntBASIC5.1□□□□□ -1.59
COPAP53621 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.1□□□□□ -1.59
COPAP53621 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.1□□□□□ -1.59
COPAP53621 AC080013.3-201ENST00000606839 578 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COPAP53621 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.1□□□□□ -1.59
COPAP53621 AC007490.1-201ENST00000624321 703 ntBASIC5.1□□□□□ -1.59
COPAP53621 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.1□□□□□ -1.59
COPAP53621 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.1□□□□□ -1.59
COPAP53621 MAPK10-349ENST00000641767 3661 ntBASIC5.1□□□□□ -1.59
COPAP53621 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPAP53621 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.1□□□□□ -1.59
COPAP53621 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COPAP53621 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COPAP53621 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.1□□□□□ -1.59
COPAP53621 AP001273.1-201ENST00000624493 3152 ntBASIC5.1□□□□□ -1.59
COPAP53621 AC083843.3-201ENST00000623679 2186 ntBASIC5.09□□□□□ -1.59
COPAP53621 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
COPAP53621 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COPAP53621 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.09□□□□□ -1.59
COPAP53621 MFSD8-216ENST00000641147 4009 ntBASIC5.09□□□□□ -1.59
COPAP53621 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 OR5H2-201ENST00000355273 945 ntBASIC5.09□□□□□ -1.59
COPAP53621 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COPAP53621 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COPAP53621 HSPD1P16-201ENST00000402302 394 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms