Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A5P29400 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.25□□□□□ -1.73
COL4A5P29400 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A5P29400 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A5P29400 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.25□□□□□ -1.73
COL4A5P29400 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL4A5P29400 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COL4A5P29400 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 AL355596.1-201ENST00000565399 3996 ntBASIC4.25□□□□□ -1.73
COL4A5P29400 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A5P29400 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A5P29400 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.24□□□□□ -1.73
COL4A5P29400 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A5P29400 IPO8P1-201ENST00000455509 3109 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 ZNF807-201ENST00000328088 1707 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A5P29400 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
COL4A5P29400 SNORA80A-201ENST00000363922 136 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 GSTA8P-201ENST00000404253 637 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 USP9YP36-201ENST00000424581 829 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 HIGD1AP12-201ENST00000427832 281 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 USP9YP31-201ENST00000431405 881 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 TPTE2P3-201ENST00000441562 1189 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 AC025750.2-201ENST00000442609 450 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 RPL7P48-201ENST00000461513 746 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 AC011825.1-201ENST00000484967 388 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 HMGB1P21-201ENST00000502313 581 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A5P29400 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A5P29400 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.24□□□□□ -1.73
COL4A5P29400 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A5P29400 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A5P29400 AC009852.2-201ENST00000567898 485 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 MIR4276-201ENST00000584832 70 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 MTCO3P22-201ENST00000603219 784 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 AL133247.2-201ENST00000603236 482 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 AC084036.1-201ENST00000609190 508 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 MIR7851-201ENST00000610611 160 ntBASIC4.24□□□□□ -1.73
COL4A5P29400 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A5P29400 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A5P29400 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A5P29400 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.24□□□□□ -1.73
COL4A5P29400 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL4A5P29400 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A5P29400 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A5P29400 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
COL4A5P29400 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 IL6STP1-201ENST00000346911 1020 ntBASIC4.23□□□□□ -1.73
COL4A5P29400 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 U3.23-201ENST00000391132 200 ntBASIC4.23□□□□□ -1.73
COL4A5P29400 RN7SKP284-201ENST00000411002 343 ntBASIC4.23□□□□□ -1.73
COL4A5P29400 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 RPL7P28-201ENST00000437739 740 ntBASIC4.23□□□□□ -1.73
COL4A5P29400 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.23□□□□□ -1.73
COL4A5P29400 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A5P29400 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A5P29400 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A5P29400 AL732618.1-201ENST00000623251 301 ntBASIC4.23□□□□□ -1.73
COL4A5P29400 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL4A5P29400 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.23□□□□□ -1.73
COL4A5P29400 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
COL4A5P29400 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A5P29400 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A5P29400 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
COL4A5P29400 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A5P29400 AL136131.1-201ENST00000406079 803 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A5P29400 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A5P29400 RN7SL429P-201ENST00000479090 223 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 RN7SL489P-201ENST00000486185 223 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 RN7SL327P-201ENST00000488659 223 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 MORF4L2P1-201ENST00000503761 858 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 SUMO2P20-201ENST00000520803 283 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.22□□□□□ -1.73
COL4A5P29400 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A5P29400 AL451007.1-201ENST00000595491 289 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 AC128687.2-201ENST00000609657 566 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 RN7SL853P-201ENST00000617250 223 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
COL4A5P29400 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
COL4A5P29400 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A5P29400 AC024341.1-201ENST00000526444 1552 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL4A5P29400 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A5P29400 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
COL4A5P29400 AC118273.1-201ENST00000525324 3006 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms