Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC005618.4-201ENST00000625053 554 ntBASIC4.71□□□□□ -1.66
TNFSF4P23510 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFSF4P23510 FP325313.1-201ENST00000638228 703 ntBASIC4.71□□□□□ -1.66
TNFSF4P23510 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.71□□□□□ -1.66
TNFSF4P23510 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF4P23510 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TNFSF4P23510 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.71□□□□□ -1.66
TNFSF4P23510 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF4P23510 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF4P23510 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF4P23510 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
TNFSF4P23510 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
TNFSF4P23510 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 ABCC13-202ENST00000463099 3842 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 FAM91A3P-201ENST00000456826 2544 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 NUP58P1-201ENST00000502546 1738 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TNFSF4P23510 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TNFSF4P23510 RNA5SP326-201ENST00000363209 110 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 RNU4-40P-201ENST00000364351 143 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TNFSF4P23510 SNORD56.6-201ENST00000384569 71 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 MT-TC-201ENST00000387405 66 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 RPL31P1-201ENST00000398116 372 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 DHFRP6-201ENST00000401776 268 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 MTND4LP20-201ENST00000402379 270 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AL031577.2-201ENST00000404133 280 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AL390316.1-201ENST00000406279 553 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 OR3A2-201ENST00000408891 1076 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 RPL7P30-201ENST00000420888 709 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC005517.2-201ENST00000424673 553 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 MTND1P20-201ENST00000430341 950 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 RPL12P17-201ENST00000432393 498 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.7□□□□□ -1.66
TNFSF4P23510 OR6D1P-201ENST00000436165 939 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC127537.2-201ENST00000439258 465 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 LINC02210-201ENST00000444561 288 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 RN7SL583P-201ENST00000475692 287 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 RPS17P5-201ENST00000498293 408 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 OR5BM1P-201ENST00000512021 366 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC022861.1-201ENST00000522981 663 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AL356057.1-201ENST00000533798 831 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC068993.1-201ENST00000546724 589 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 SNORD95-201ENST00000579879 68 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 MIR6768-201ENST00000610734 72 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 uc_338.7-201ENST00000621834 124 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AC091931.1-201ENST00000623488 728 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 AL355480.1-201ENST00000629041 99 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TNFSF4P23510 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC004076.2-201ENST00000620532 3323 ntBASIC4.7□□□□□ -1.66
TNFSF4P23510 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF4P23510 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF4P23510 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
TNFSF4P23510 AC100757.1-201ENST00000616872 1835 ntBASIC4.69□□□□□ -1.66
TNFSF4P23510 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF4P23510 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TNFSF4P23510 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
TNFSF4P23510 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TNFSF4P23510 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF4P23510 AC074029.4-201ENST00000624796 1859 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms