Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.01□□□□□ -1.45
NID1P14543 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.01□□□□□ -1.45
NID1P14543 RN7SL208P-201ENST00000577964 296 ntBASIC6.01□□□□□ -1.45
NID1P14543 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.01□□□□□ -1.45
NID1P14543 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.01□□□□□ -1.45
NID1P14543 MIR5690-201ENST00000583739 73 ntBASIC6.01□□□□□ -1.45
NID1P14543 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.01□□□□□ -1.45
NID1P14543 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.01□□□□□ -1.45
NID1P14543 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.01□□□□□ -1.45
NID1P14543 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.01□□□□□ -1.45
NID1P14543 PRR13P7-201ENST00000605538 430 ntBASIC6.01□□□□□ -1.45
NID1P14543 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.01□□□□□ -1.45
NID1P14543 AC007546.1-201ENST00000619452 559 ntBASIC6.01□□□□□ -1.45
NID1P14543 AL162373.1-201ENST00000620433 407 ntBASIC6.01□□□□□ -1.45
NID1P14543 MRPL57P1-201ENST00000621486 265 ntBASIC6.01□□□□□ -1.45
NID1P14543 AC005514.1-201ENST00000623521 208 ntBASIC6.01□□□□□ -1.45
NID1P14543 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NID1P14543 AC097504.1-201ENST00000515103 2415 ntBASIC6.01□□□□□ -1.45
NID1P14543 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.01□□□□□ -1.45
NID1P14543 AC022034.1-201ENST00000512867 2156 ntBASIC6.01□□□□□ -1.45
NID1P14543 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.01□□□□□ -1.45
NID1P14543 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
NID1P14543 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
NID1P14543 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.01□□□□□ -1.45
NID1P14543 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NID1P14543 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6□□□□□ -1.45
NID1P14543 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 AC011455.2-201ENST00000599320 3336 ntBASIC6□□□□□ -1.45
NID1P14543 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 PPIAP24-201ENST00000328558 471 ntBASIC6□□□□□ -1.45
NID1P14543 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 Y_RNA.489-201ENST00000384410 101 ntBASIC6□□□□□ -1.45
NID1P14543 RN7SKP158-201ENST00000410453 326 ntBASIC6□□□□□ -1.45
NID1P14543 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6□□□□□ -1.45
NID1P14543 RPL31P12-201ENST00000422587 358 ntBASIC6□□□□□ -1.45
NID1P14543 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6□□□□□ -1.45
NID1P14543 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6□□□□□ -1.45
NID1P14543 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6□□□□□ -1.45
NID1P14543 AC006512.1-201ENST00000468816 291 ntBASIC6□□□□□ -1.45
NID1P14543 AC022415.1-202ENST00000486612 523 ntBASIC6□□□□□ -1.45
NID1P14543 AC015524.1-201ENST00000491585 472 ntBASIC6□□□□□ -1.45
NID1P14543 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6□□□□□ -1.45
NID1P14543 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6□□□□□ -1.45
NID1P14543 FTH1P8-201ENST00000498161 514 ntBASIC6□□□□□ -1.45
NID1P14543 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6□□□□□ -1.45
NID1P14543 SNORA25.10-201ENST00000515926 124 ntBASIC6□□□□□ -1.45
NID1P14543 AC005519.1-201ENST00000554490 601 ntBASIC6□□□□□ -1.45
NID1P14543 AC092332.1-201ENST00000563684 829 ntBASIC6□□□□□ -1.45
NID1P14543 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6□□□□□ -1.45
NID1P14543 MIR212-201ENST00000586026 110 ntBASIC6□□□□□ -1.45
NID1P14543 AC026898.1-201ENST00000586404 571 ntBASIC6□□□□□ -1.45
NID1P14543 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6□□□□□ -1.45
NID1P14543 AC011500.1-201ENST00000601963 469 ntBASIC6□□□□□ -1.45
NID1P14543 AC013244.1-201ENST00000604279 193 ntBASIC6□□□□□ -1.45
NID1P14543 SNORD96A-201ENST00000606577 79 ntBASIC6□□□□□ -1.45
NID1P14543 AC100812.1-201ENST00000607622 580 ntBASIC6□□□□□ -1.45
NID1P14543 AL080312.2-201ENST00000613001 630 ntBASIC6□□□□□ -1.45
NID1P14543 AC133104.2-201ENST00000615272 193 ntBASIC6□□□□□ -1.45
NID1P14543 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6□□□□□ -1.45
NID1P14543 AL132640.3-201ENST00000630473 177 ntBASIC6□□□□□ -1.45
NID1P14543 HDAC1P2-201ENST00000453661 1398 ntBASIC6□□□□□ -1.45
NID1P14543 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
NID1P14543 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6□□□□□ -1.45
NID1P14543 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 AL161901.1-201ENST00000624954 3425 ntBASIC6□□□□□ -1.45
NID1P14543 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NID1P14543 VPS35P1-201ENST00000563400 1518 ntBASIC5.99□□□□□ -1.45
NID1P14543 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 AC105235.1-201ENST00000623208 1816 ntBASIC5.99□□□□□ -1.45
NID1P14543 AL049641.1-201ENST00000441055 1948 ntBASIC5.99□□□□□ -1.45
NID1P14543 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
NID1P14543 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NID1P14543 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms