Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ATP5F1P2-201ENST00000398143 760 ntBASIC4.17□□□□□ -1.74
PRKNO60260 RAD23BP1-201ENST00000421404 1227 ntBASIC4.17□□□□□ -1.74
PRKNO60260 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRKNO60260 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.17□□□□□ -1.74
PRKNO60260 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.17□□□□□ -1.74
PRKNO60260 AL450263.2-201ENST00000439400 589 ntBASIC4.17□□□□□ -1.74
PRKNO60260 CBX1P1-201ENST00000440184 427 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AL929288.2-201ENST00000446368 407 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 TRBV8-2-201ENST00000475637 270 ntBASIC4.17□□□□□ -1.74
PRKNO60260 RPL23AP44-201ENST00000482216 473 ntBASIC4.17□□□□□ -1.74
PRKNO60260 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.17□□□□□ -1.74
PRKNO60260 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 HPRT1P2-201ENST00000505250 544 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.17□□□□□ -1.74
PRKNO60260 AC108471.1-201ENST00000513977 287 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.17□□□□□ -1.74
PRKNO60260 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 AP002812.4-201ENST00000532139 286 ntBASIC4.17□□□□□ -1.74
PRKNO60260 MTCO2P15-201ENST00000532655 656 ntBASIC4.17□□□□□ -1.74
PRKNO60260 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.17□□□□□ -1.74
PRKNO60260 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.17□□□□□ -1.74
PRKNO60260 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRKNO60260 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 BNIP3P4-201ENST00000604946 565 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AL139344.1-201ENST00000605228 195 ntBASIC4.17□□□□□ -1.74
PRKNO60260 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKNO60260 AC139769.3-201ENST00000618383 175 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AL158163.2-201ENST00000619110 700 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AP005019.3-201ENST00000620418 560 ntBASIC4.17□□□□□ -1.74
PRKNO60260 OR1S1-201ENST00000624470 978 ntBASIC4.17□□□□□ -1.74
PRKNO60260 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PRKNO60260 AC021242.1-201ENST00000507315 2035 ntBASIC4.17□□□□□ -1.74
PRKNO60260 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRKNO60260 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRKNO60260 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
PRKNO60260 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRKNO60260 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PRKNO60260 NXPH1-205ENST00000602349 1953 ntBASIC4.16□□□□□ -1.74
PRKNO60260 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 LINC00622-201ENST00000562811 1570 ntBASIC4.16□□□□□ -1.74
PRKNO60260 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PRKNO60260 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 SDHCP2-201ENST00000398565 501 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC107081.1-201ENST00000414975 361 ntBASIC4.16□□□□□ -1.74
PRKNO60260 OR4K6P-201ENST00000416478 897 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AL139095.3-201ENST00000419672 1203 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AL592293.2-201ENST00000422292 996 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.16□□□□□ -1.74
PRKNO60260 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.16□□□□□ -1.74
PRKNO60260 NPM1P33-201ENST00000438918 872 ntBASIC4.16□□□□□ -1.74
PRKNO60260 RPS26P2-201ENST00000440331 348 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.16□□□□□ -1.74
PRKNO60260 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.16□□□□□ -1.74
PRKNO60260 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.16□□□□□ -1.74
PRKNO60260 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.16□□□□□ -1.74
PRKNO60260 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.16□□□□□ -1.74
PRKNO60260 RNA5SP446-201ENST00000515955 82 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.16□□□□□ -1.74
PRKNO60260 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.16□□□□□ -1.74
PRKNO60260 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 AP000827.1-201ENST00000527814 258 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC009643.1-201ENST00000532030 391 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.16□□□□□ -1.74
PRKNO60260 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.16□□□□□ -1.74
PRKNO60260 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 ZNF321P-202ENST00000550843 495 ntBASIC4.16□□□□□ -1.74
PRKNO60260 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.16□□□□□ -1.74
PRKNO60260 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.16□□□□□ -1.74
PRKNO60260 MIR4472-2-201ENST00000582069 67 ntBASIC4.16□□□□□ -1.74
PRKNO60260 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 VN1R83P-201ENST00000595685 445 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AL160290.3-201ENST00000604869 165 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC096553.1-201ENST00000605169 829 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AL356218.2-201ENST00000605264 187 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC016877.3-201ENST00000606778 504 ntBASIC4.16□□□□□ -1.74
PRKNO60260 AC055764.2-201ENST00000610089 670 ntBASIC4.16□□□□□ -1.74
PRKNO60260 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms