Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
LSM1O15116 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM1O15116 RNU6-398P-201ENST00000384143 109 ntBASIC3.97□□□□□ -1.77
LSM1O15116 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM1O15116 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM1O15116 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM1O15116 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM1O15116 RPS29P17-201ENST00000430795 166 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AC011742.1-201ENST00000431448 434 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM1O15116 RPL23AP46-201ENST00000438548 490 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM1O15116 AP002345.1-201ENST00000456493 928 ntBASIC3.97□□□□□ -1.77
LSM1O15116 RPL23AP24-201ENST00000458203 385 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AF213884.1-201ENST00000488102 463 ntBASIC3.97□□□□□ -1.77
LSM1O15116 RPL30P11-201ENST00000495304 339 ntBASIC3.97□□□□□ -1.77
LSM1O15116 RPL31P61-201ENST00000496160 376 ntBASIC3.97□□□□□ -1.77
LSM1O15116 HMGB1P3-201ENST00000502802 616 ntBASIC3.97□□□□□ -1.77
LSM1O15116 FTH1P24-201ENST00000503502 462 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM1O15116 AC109458.1-201ENST00000508858 316 ntBASIC3.97□□□□□ -1.77
LSM1O15116 RNA5SP143-201ENST00000516936 115 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM1O15116 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM1O15116 AC105233.3-201ENST00000531125 744 ntBASIC3.97□□□□□ -1.77
LSM1O15116 PDCL2P2-201ENST00000533651 189 ntBASIC3.97□□□□□ -1.77
LSM1O15116 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM1O15116 MIR4715-201ENST00000584117 79 ntBASIC3.97□□□□□ -1.77
LSM1O15116 NF1P5-201ENST00000588287 448 ntBASIC3.97□□□□□ -1.77
LSM1O15116 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM1O15116 AC104662.1-201ENST00000604448 511 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AC099669.2-201ENST00000616549 437 ntBASIC3.97□□□□□ -1.77
LSM1O15116 U6.98-201ENST00000637157 84 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AL773545.4-201ENST00000637262 310 ntBASIC3.97□□□□□ -1.77
LSM1O15116 AL513478.4-201ENST00000641636 310 ntBASIC3.97□□□□□ -1.77
LSM1O15116 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM1O15116 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM1O15116 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
LSM1O15116 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.77
LSM1O15116 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
LSM1O15116 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM1O15116 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LSM1O15116 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM1O15116 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM1O15116 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM1O15116 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 RNU4-74P-201ENST00000411280 161 ntBASIC3.96□□□□□ -1.78
LSM1O15116 USP12PY-201ENST00000427677 1064 ntBASIC3.96□□□□□ -1.78
LSM1O15116 MTCO1P57-201ENST00000432182 261 ntBASIC3.96□□□□□ -1.78
LSM1O15116 RPS3AP54-201ENST00000435535 734 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AL031663.1-201ENST00000437445 219 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AL356535.1-201ENST00000440335 398 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM1O15116 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 RNA5SP246-201ENST00000458909 119 ntBASIC3.96□□□□□ -1.78
LSM1O15116 RPS20P4-201ENST00000461659 355 ntBASIC3.96□□□□□ -1.78
LSM1O15116 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.96□□□□□ -1.78
LSM1O15116 AC107398.1-201ENST00000486904 505 ntBASIC3.96□□□□□ -1.78
LSM1O15116 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 HMGB1P21-201ENST00000502313 581 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.96□□□□□ -1.78
LSM1O15116 AC093720.1-201ENST00000505681 714 ntBASIC3.96□□□□□ -1.78
LSM1O15116 OR5H4P-201ENST00000510851 923 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AC010285.3-201ENST00000511668 676 ntBASIC3.96□□□□□ -1.78
LSM1O15116 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
LSM1O15116 MTND1P6-201ENST00000523621 946 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.96□□□□□ -1.78
LSM1O15116 OR4A2P-201ENST00000527276 913 ntBASIC3.96□□□□□ -1.78
LSM1O15116 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.96□□□□□ -1.78
LSM1O15116 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.96□□□□□ -1.78
LSM1O15116 AC022655.2-201ENST00000577280 318 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM1O15116 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM1O15116 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.96□□□□□ -1.78
LSM1O15116 AC005191.1-201ENST00000603950 358 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AC092653.1-201ENST00000608509 531 ntBASIC3.96□□□□□ -1.78
LSM1O15116 AC116651.1-201ENST00000609724 556 ntBASIC3.96□□□□□ -1.78
LSM1O15116 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.96□□□□□ -1.78
LSM1O15116 AC092628.2-201ENST00000622492 339 ntBASIC3.96□□□□□ -1.78
LSM1O15116 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM1O15116 AL139254.3-201ENST00000641097 674 ntBASIC3.96□□□□□ -1.78
LSM1O15116 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
LSM1O15116 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LSM1O15116 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LSM1O15116 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM1O15116 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
LSM1O15116 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LSM1O15116 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LSM1O15116 MAPK10-373ENST00000641983 6772 ntBASIC3.95□□□□□ -1.78
LSM1O15116 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
LSM1O15116 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LSM1O15116 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LSM1O15116 IGKV7-3-201ENST00000357453 298 ntBASIC3.95□□□□□ -1.78
LSM1O15116 RNA5SP447-201ENST00000363749 119 ntBASIC3.95□□□□□ -1.78
LSM1O15116 RNU1-132P-201ENST00000364300 164 ntBASIC3.95□□□□□ -1.78
LSM1O15116 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms