Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 USP9YP35-201ENST00000435696 412 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AL357520.1-201ENST00000441557 453 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AP006222.1-205ENST00000450734 457 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 HMGB1P4-201ENST00000455362 567 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC093899.1-201ENST00000457984 376 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 RPL7AP10-201ENST00000481016 791 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 RPL7P41-201ENST00000485823 957 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC104109.1-201ENST00000498563 436 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 OR6C7P-201ENST00000547875 934 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 RN7SL176P-201ENST00000580352 264 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 VN1R84P-201ENST00000593697 235 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC020914.6-201ENST00000594327 272 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC116165.2-201ENST00000616705 206 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 SAMMSON-209ENST00000641222 1100 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC139713.2-215ENST00000641428 5037 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 AC005832.2-201ENST00000538921 1430 ntBASIC5.73□□□□□ -1.49
CCDC66A2RUB6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC66A2RUB6 SRRM1P3-201ENST00000426911 2678 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC091305.2-201ENST00000624049 1576 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC096656.1-201ENST00000623826 1364 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 Y_RNA.6-201ENST00000362350 114 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 RNU6-374P-201ENST00000364146 108 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 RNU6-660P-201ENST00000364566 109 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 GAPDHP42-201ENST00000406848 981 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 RNU6-272P-201ENST00000411028 104 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 DYNLL1P7-201ENST00000429273 258 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC241584.1-201ENST00000438469 1241 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 RPL7P51-201ENST00000490532 749 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 RPS24P16-201ENST00000497294 392 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 RNY4P37-201ENST00000516225 96 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 RNU6-1261P-201ENST00000517194 104 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 IGKV3D-34-201ENST00000522638 302 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC105233.3-201ENST00000531125 744 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AL139174.1-201ENST00000531489 886 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 TRAV15-201ENST00000556680 249 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC243756.2-201ENST00000618406 463 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC092650.2-201ENST00000619984 902 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AC025048.6-202ENST00000627667 438 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 MIR193BHG-214ENST00000641765 509 ntBASIC5.72□□□□□ -1.49
CCDC66A2RUB6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC66A2RUB6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC66A2RUB6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.71□□□□□ -1.49
CCDC66A2RUB6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC66A2RUB6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC66A2RUB6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC66A2RUB6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC66A2RUB6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC66A2RUB6 RNU1-94P-201ENST00000362627 173 ntBASIC5.71□□□□□ -1.5
CCDC66A2RUB6 RNA5SP394-201ENST00000364216 119 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms