Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TCRBV7S3A2A0A539 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 GSTA8P-201ENST00000404253 637 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 RN7SKP100-201ENST00000411258 284 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC009237.10-201ENST00000414112 510 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 DPRXP1-201ENST00000426312 460 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 RPL23AP76-201ENST00000441860 458 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 FHP1-201ENST00000442741 703 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 CEACAMP7-201ENST00000444105 496 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AL133217.1-201ENST00000450980 425 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 RFC5P1-201ENST00000454419 874 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 RPL37P3-201ENST00000456825 293 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AL133477.1-201ENST00000457472 514 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC010468.1-201ENST00000461022 817 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC117522.2-201ENST00000510049 657 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC007016.1-201ENST00000512110 244 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 TCP11X3P-202ENST00000514289 1254 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 IGLV2-28-201ENST00000520681 304 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 IGLV3-26-201ENST00000520756 302 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC004217.3-201ENST00000551552 878 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 DUXAP1-201ENST00000556632 463 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AL132657.2-201ENST00000564417 358 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC233702.9-201ENST00000581528 203 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC103792.1-201ENST00000603591 919 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AP003973.1-201ENST00000604639 691 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AL133507.1-201ENST00000605269 557 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC008966.2-201ENST00000606157 453 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AL353600.1-201ENST00000608148 251 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 MIR6853-201ENST00000619642 74 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC103706.2-201ENST00000638080 240 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC009313.2-201ENST00000417893 1941 ntBASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV7S3A2A0A539 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC092435.4-201ENST00000623012 4159 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 KARSP3-201ENST00000571212 1504 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC021146.4-201ENST00000309229 279 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AL590240.1-201ENST00000334118 313 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 RNU6-839P-201ENST00000363347 108 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 Y_RNA.169-201ENST00000363745 96 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 RNU1-63P-201ENST00000383902 164 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 HDGFP1-201ENST00000405943 252 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 VDAC1P9-201ENST00000412766 841 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 CEACAMP8-201ENST00000413902 580 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 ATG4AP1-201ENST00000416893 538 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC006960.1-201ENST00000419980 153 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 GTF2IP23-201ENST00000423746 351 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 Z93242.1-201ENST00000427102 353 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 ACTR3P2-201ENST00000439585 1257 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 MTCO2P25-201ENST00000447065 681 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 RPS27AP15-201ENST00000447672 466 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 RPL21P134-201ENST00000453468 483 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 PNPLA4P1-201ENST00000458328 305 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC012123.2-201ENST00000485809 248 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC004453.1-201ENST00000487895 408 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC104090.1-201ENST00000506341 1171 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 695.5 ms