Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 AC023206.1-201ENST00000605824 298 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 AC019193.3-201ENST00000609144 554 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 AL138960.1-201ENST00000613838 513 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 AC244100.1-202ENST00000621554 382 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 AC006453.3-201ENST00000635891 377 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 AC011933.2-201ENST00000578539 2790 ntBASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
PCDHGA11Q9Y5H2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.133-201ENST00000363428 110 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.197-201ENST00000364004 102 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RN7SKP130-201ENST00000364924 301 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNY3P13-201ENST00000365542 102 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 SNORA22B-201ENST00000383876 138 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.401-201ENST00000383965 117 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-38P-201ENST00000384085 107 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNA5SP35-201ENST00000391257 129 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 MTCYBP4-201ENST00000401524 249 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC092832.1-201ENST00000422934 400 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 H3F3BP1-201ENST00000440551 403 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 PFN1P11-201ENST00000445829 389 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-333P-201ENST00000459117 107 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 H3F3AP3-201ENST00000497682 407 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNA5SP92-201ENST00000516437 110 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-1046P-201ENST00000516538 107 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RN7SKP219-201ENST00000516825 296 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNA5SP75-201ENST00000516841 111 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-988P-201ENST00000519081 107 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 IGLV3-6-201ENST00000523937 250 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC011477.5-201ENST00000586571 259 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AL512782.1-201ENST00000603093 364 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 AL731556.1-201ENST00000394628 3711 ntBASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHGA11Q9Y5H2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 HSPE1P11-201ENST00000339579 310 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RNA5SP258-201ENST00000362750 119 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RNA5SP188-201ENST00000362916 129 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RNA5SP429-201ENST00000363688 109 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 Y_RNA.234-201ENST00000364409 97 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-1105P-201ENST00000384774 107 ntBASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHGA11Q9Y5H2 RPL34P3-201ENST00000421454 338 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms