Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC016542.1-201ENST00000608259 493 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 MIR8069-1-201ENST00000616627 86 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 MIR8069-2-201ENST00000621412 86 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC126323.6-202ENST00000568092 3511 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 MAPK10-372ENST00000641954 3413 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 SNORA31-201ENST00000362607 130 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 RNA5SP505-201ENST00000364748 108 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 MIR3074-201ENST00000384885 81 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 UBE2V1P9-201ENST00000414760 368 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC233981.1-201ENST00000423224 461 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 COX6CP15-201ENST00000426313 211 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC096632.1-201ENST00000427395 310 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 FGF7P3-201ENST00000454645 303 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 RPS27P23-201ENST00000487608 251 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC008897.1-201ENST00000494006 347 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC111000.3-201ENST00000508057 576 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC104057.1-201ENST00000515547 497 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 RNA5SP309-201ENST00000516670 106 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AL136520.1-202ENST00000555494 763 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC023824.3-201ENST00000569003 562 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 MIR5096-201ENST00000583713 70 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AP004247.3-201ENST00000608682 624 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AC097505.1-201ENST00000610199 565 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 AL592494.2-201ENST00000425455 1548 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 MTND4P26-201ENST00000415971 1359 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4AQ9BY43 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC016716.1-201ENST00000265882 708 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 UBBP2-201ENST00000376781 231 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 FAR2P2-201ENST00000413041 594 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 BX664727.1-201ENST00000416024 466 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC006994.1-201ENST00000438212 839 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 ARL2BPP10-201ENST00000446487 531 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 RN7SKP46-201ENST00000515942 234 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC084783.1-201ENST00000565846 910 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 MTND4LP25-201ENST00000570218 163 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 MIR4284-201ENST00000578924 81 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 RN7SL435P-201ENST00000584418 282 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 IGHV3-29-201ENST00000604817 344 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 uc_338.32-201ENST00000615087 172 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AL356118.1-201ENST00000635272 1078 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC139713.2-215ENST00000641428 5037 ntBASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
CHMP4AQ9BY43 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.9□□□□□ -1.46
CHMP4AQ9BY43 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms