Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 EIF2S2P2-201ENST00000447161 982 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 RPL29P29-201ENST00000448725 423 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 OR1H1P-201ENST00000448731 937 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AL451050.1-201ENST00000450126 415 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC234781.3-201ENST00000452540 973 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 BX248409.1-201ENST00000455497 255 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC093166.2-201ENST00000455969 1017 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 HMGB3P30-201ENST00000457863 606 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.97□□□□□ -1.77
SSX3Q99909 RN7SL41P-201ENST00000476144 297 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSX3Q99909 SNX5P1-201ENST00000505757 1041 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSX3Q99909 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX3Q99909 AP003066.2-201ENST00000529375 555 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC124293.1-201ENST00000530034 493 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 CBX3P5-201ENST00000552017 521 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.97□□□□□ -1.77
SSX3Q99909 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.97□□□□□ -1.77
SSX3Q99909 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.97□□□□□ -1.77
SSX3Q99909 MIR3667-201ENST00000581025 74 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC008507.2-201ENST00000588402 1176 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.97□□□□□ -1.77
SSX3Q99909 AC104785.1-201ENST00000603220 588 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC020910.3-201ENST00000603701 874 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC091488.1-201ENST00000604239 660 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC112503.1-201ENST00000608436 391 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC020634.1-201ENST00000608701 549 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX3Q99909 AL049794.2-201ENST00000616301 365 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.97□□□□□ -1.77
SSX3Q99909 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX3Q99909 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
SSX3Q99909 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SSX3Q99909 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.96□□□□□ -1.77
SSX3Q99909 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 SNORA73.1-201ENST00000363107 205 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 RNU5B-4P-201ENST00000363508 111 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 LRRC37BP1-201ENST00000398851 714 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 AL592291.1-201ENST00000403830 352 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 RNU6-77P-201ENST00000410554 91 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX3Q99909 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX3Q99909 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 GTF2IP5-201ENST00000414608 731 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
SSX3Q99909 RPL21P110-201ENST00000433345 446 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX3Q99909 AL353748.1-201ENST00000440753 474 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SSX3Q99909 MTND1P33-201ENST00000446251 917 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.96□□□□□ -1.78
SSX3Q99909 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX3Q99909 AL691482.1-201ENST00000453255 87 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 RN7SL558P-201ENST00000497468 299 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AC008885.2-201ENST00000509506 930 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 AC093755.1-201ENST00000512950 1023 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX3Q99909 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX3Q99909 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX3Q99909 AC023825.1-201ENST00000566704 1030 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AC090666.1-201ENST00000578241 445 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SSX3Q99909 RNA5SP108-201ENST00000605921 117 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 AC234782.5-201ENST00000617723 324 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 AC138649.5-201ENST00000637456 137 ntBASIC3.96□□□□□ -1.78
SSX3Q99909 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX3Q99909 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX3Q99909 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 RN7SKP115-201ENST00000363177 317 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 RNU5B-1-201ENST00000363286 116 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 RNA5SP87-201ENST00000384155 118 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSX3Q99909 ENSAP1-201ENST00000392855 326 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSX3Q99909 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms